RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NOBOXO60393 691 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 CR2P20023 1033 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 KLRC1P26715 233 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 SLC11A2P49281 568 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 POU5F1BQ06416 359 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 KCNA10Q16322 511 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 FAM214AQ32MH5 1076 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
VMP1-215ENST00000592619 MFSD5Q6N075 450 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 BORAQ6PGQ7 559 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 USP37Q86T82 979 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 FAM83AQ86UY5 434 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 ZNF354CQ86Y25 554 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 TXLNBQ8N3L3 684 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
VMP1-215ENST00000592619 GDF15Q99988 308 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
VMP1-215ENST00000592619 SIK2Q9H0K1 926 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 EPC1Q9H2F5 836 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 C12orf65Q9H3J6 166 aaKnown RBP7.52□□□□□ -1.21
VMP1-215ENST00000592619 FBXO34Q9NWN3 711 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 SLC45A2Q9UMX9 530 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 MAGED2Q9UNF1 606 aaPredicted RBP7.52□□□□□ -1.21
VMP1-215ENST00000592619 CLCA2Q9UQC9 943 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 DGKBQ9Y6T7 804 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 UNC5CO95185 931 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 CSTBP04080 98 aaKnown RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 IL1R1P14778 569 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 CCT5P48643 541 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 ALDH9A1P49189 494 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 RENBPP51606 427 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 PSMC1P62191 440 aaKnown RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 ELF2Q15723 593 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 CCDC38Q502W7 563 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 METTL24Q5JXM2 366 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 ATXN7L2Q5T6C5 722 aaPredicted RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 DRICH1Q6PGQ1 229 aaPredicted RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 FAM43BQ6ZT52 329 aaPredicted RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 UNC13DQ70J99 1090 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 RNF44Q7L0R7 432 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 DNAJC5GQ8N7S2 189 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 PCSK9Q8NBP7 692 aaKnown RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 CYP2W1Q8TAV3 490 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 IPCEF1Q8WWN9 437 aaPredicted RBP7.51□□□□□ -1.21
VMP1-215ENST00000592619 SLC38A3Q99624 504 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 DPYSL5Q9BPU6 564 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 CHST8Q9H2A9 424 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 TM7SF3Q9NS93 570 aa7.51□□□□□ -1.21
VMP1-215ENST00000592619 ZNF785A8K8V0 405 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 SKAP2O75563 359 aaPredicted RBP7.5□□□□□ -1.21
VMP1-215ENST00000592619 PTMAP06454 111 aaKnown RBP7.5□□□□□ -1.21
VMP1-215ENST00000592619 GRPP07492 148 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 TXNP10599 105 aaKnown RBP7.5□□□□□ -1.21
VMP1-215ENST00000592619 CARSP49589 748 aaKnown RBP7.5□□□□□ -1.21
VMP1-215ENST00000592619 RAP2BP61225 183 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 PPP2CBP62714 309 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 PPP2CAP67775 309 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 AMOTQ4VCS5 1084 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 FKBP15Q5T1M5 1219 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 LDHAL6AQ6ZMR3 332 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 XYLT1Q86Y38 959 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 MYCT1Q8N699 235 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 FITM2Q8N6M3 262 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 VGLL2Q8N8G2 317 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 OR56A3Q8NH54 315 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 TFAP2CQ92754 450 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
VMP1-215ENST00000592619 MAF1Q9H063 256 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 MYLK2Q9H1R3 596 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 GJB4Q9NTQ9 266 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 TMX2Q9Y320 296 aa7.5□□□□□ -1.21
VMP1-215ENST00000592619 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 MYO1CO00159 1063 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 SH3BP5O60239 455 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 CDC14BO60729 498 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 AGFG2O95081 481 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 PIM1P11309 404 aaPredicted RBP7.49□□□□□ -1.21
VMP1-215ENST00000592619 MYL4P12829 197 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 PDIA3P30101 505 aaKnown RBP7.49□□□□□ -1.21
VMP1-215ENST00000592619 RPS19P39019 145 aaKnown RBP7.49□□□□□ -1.21
VMP1-215ENST00000592619 ZNF135P52742 658 aaPredicted RBP7.49□□□□□ -1.21
VMP1-215ENST00000592619 UCP3P55916 312 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 BIRC3Q13489 604 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 CRB2Q5IJ48 1285 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 TCERG1LQ5VWI1 586 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 EFCAB12Q6NXP0 572 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 ARHGEF18Q6ZSZ5 1173 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 LGI4Q8N135 537 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 SLC15A4Q8N697 577 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 HECAQ9UBI9 543 aaPredicted RBP7.49□□□□□ -1.21
VMP1-215ENST00000592619 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 HDAC5Q9UQL6 1122 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 MAN2B2Q9Y2E5 1009 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 RNF114Q9Y508 228 aa7.49□□□□□ -1.21
VMP1-215ENST00000592619 UGGT2Q9NYU1 1516 aa7.48□□□□□ -1.21
VMP1-215ENST00000592619 PRR5-ARHGAP8B1AHC4 643 aa7.48□□□□□ -1.21
VMP1-215ENST00000592619 INHBBP09529 407 aa7.48□□□□□ -1.21
VMP1-215ENST00000592619 HSD3B1P14060 373 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms