RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 SCN1AP35498 2009 aa8.12□□□□□ -1.11
VAT1-209ENST00000592388 GOLGA4Q13439 2230 aaKnown RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 OBSL1O75147 1896 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 ATXN2Q99700 1313 aaKnown RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 A0A1B0GUA9 196 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 ARHGEF35A5YM69 484 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 TRABD2BA6NFA1 517 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 CAPN8A6NHC0 703 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PP2D1A8MPX8 630 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PRRG1O14668 218 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PTGESO14684 152 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 SH3BP5O60239 455 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 WISP1O95388 367 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 EGFP01133 1207 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 NTRK1P04629 796 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 CFIP05156 583 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PRKCBP05771 671 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 IGFBP6P24592 240 aaPredicted RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 ELF1P32519 619 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 POU5F1BQ06416 359 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 FCHO2Q0JRZ9 810 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 GRSF1Q12849 480 aaKnown RBP eCLIP8.11□□□□□ -1.11
VAT1-209ENST00000592388 HNRNPDQ14103 355 aaKnown RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 PCBP1Q15365 356 aaKnown RBP eCLIP8.11□□□□□ -1.111e-8■■■■■ 53.4
VAT1-209ENST00000592388 SAFBQ15424 915 aaKnown RBP eCLIP8.11□□□□□ -1.11
VAT1-209ENST00000592388 MAPK6Q16659 721 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 USP39Q53GS9 565 aaKnown RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 GLRA4Q5JXX5 417 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 ZBTB8OSQ8IWT0 167 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 E2F7Q96AV8 911 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 FCRL3Q96P31 734 aaPredicted RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 LRRC3BQ96PB8 259 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 KIF2CQ99661 725 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 TRPV4Q9HBA0 871 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PRMT7Q9NVM4 692 aaPredicted RBP8.11□□□□□ -1.11
VAT1-209ENST00000592388 EBF1Q9UH73 591 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PI4KAP42356 2102 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 PTPRQQ9UMZ3 2332 aa8.11□□□□□ -1.11
VAT1-209ENST00000592388 ZMYM2Q9UBW7 1377 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 COL6A6A6NMZ7 2263 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 ARHGEF37A1IGU5 675 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 CD59P13987 128 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 RPA1P27694 616 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 NCBP1Q09161 790 aaKnown RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 PRPF4BQ13523 1007 aaKnown RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 DMC1Q14565 340 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 TMEM196Q5HYL7 178 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 IQCEQ6IPM2 695 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 PCSK4Q6UW60 755 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 TOGARAM2Q6ZUX3 1019 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 HAUS6Q7Z4H7 955 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 SLCO6A1Q86UG4 719 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 HACE1Q8IYU2 909 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 CEP120Q8N960 986 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 RPLP0P6Q8NHW5 317 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 DEPTORQ8TB45 409 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 POLR3CQ9BUI4 534 aaPredicted RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 FZD8Q9H461 694 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 CYP4F11Q9HBI6 524 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 GOLGA2P5Q9HBQ8 144 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 MTRRQ9UBK8 725 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 CIZ1Q9ULV3 898 aaPredicted RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 LIMCH1Q9UPQ0 1083 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
VAT1-209ENST00000592388 NUP210Q8TEM1 1887 aaPredicted RBP8.1□□□□□ -1.11
VAT1-209ENST00000592388 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 DPYSL4O14531 572 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 N4BP3O15049 544 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 XRCC6P12956 609 aaKnown RBP eCLIP8.09□□□□□ -1.11
VAT1-209ENST00000592388 CYP11B2P19099 503 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 CDC25AP30304 524 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 PTGER3P43115 390 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 NAMPTP43490 491 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 TOB1P50616 345 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 ARPP19P56211 112 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 ROR1Q01973 937 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 ELAVL2Q12926 359 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 TUSC3Q13454 348 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 NAB2Q15742 525 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 IL17AQ16552 155 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 FAM187BQ17R55 369 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 TAF1BQ53T94 588 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 SLC23A3Q6PIS1 610 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 SYT13Q7L8C5 426 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 SYT12Q8IV01 421 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms