RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 DPP3Q9NY33 737 aa8.21□□□□□ -1.1
NPC1-208ENST00000590301 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.1
NPC1-208ENST00000590301 CEP72Q9P209 647 aa8.21□□□□□ -1.1
NPC1-208ENST00000590301 METRNQ9UJH8 293 aa8.21□□□□□ -1.1
NPC1-208ENST00000590301 TIMM13Q9Y5L4 95 aaPredicted RBP8.21□□□□□ -1.1
NPC1-208ENST00000590301 MTMR11A4FU01 709 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 PRR23AA6NEV1 266 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 KPNA7A9QM74 516 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 TISP43B9A030 160 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 CYB561D2O14569 222 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 PPEF2O14830 753 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 EXTL3O43909 919 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 CUTAO60888 179 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 HSP90AA1P07900 732 aaKnown RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 MYL4P12829 197 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 PSMC3P17980 439 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 WEE1P30291 646 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 CCR2P41597 374 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 RPS9P46781 194 aaKnown RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 SNRPFP62306 86 aaKnown RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 SURF1Q15526 300 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 NFE2Q16621 373 aaPredicted RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 ZNF528Q3MIS6 628 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 TANGO2Q6ICL3 276 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 CRELD2Q6UXH1 353 aaPredicted RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 FRMD5Q7Z6J6 570 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 HSCBQ8IWL3 235 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 DCP1BQ8IZD4 617 aaKnown RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 TMEM86AQ8N2M4 240 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 IQUBQ8NA54 791 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 SPPL2BQ8TCT7 592 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 KCNG4Q8TDN1 519 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 PSMG2Q969U7 264 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 TCEAL4Q96EI5 215 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 GCNAQ96QF7 691 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 PYM1Q9BRP8 204 aaKnown RBP8.2□□□□□ -1.1
NPC1-208ENST00000590301 FAM213AQ9BRX8 229 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 ZCWPW1Q9H0M4 648 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 SLITRK6Q9H5Y7 841 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 BRD9Q9H8M2 597 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 LTB4R2Q9NPC1 389 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 KBTBD4Q9NVX7 518 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 OBP2AQ9NY56 170 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 FBXO4Q9UKT5 387 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
NPC1-208ENST00000590301 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 SOBPA7XYQ1 873 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 EIF3DO15371 548 aaKnown RBP eCLIP8.19□□□□□ -1.1
NPC1-208ENST00000590301 LAMTOR5O43504 91 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 HUS1O60921 280 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 MOSPD3O75425 235 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 VNN2O95498 520 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 DCNP07585 359 aaKnown RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 OR4Q2P0C623 313 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 C7P10643 843 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 CDC25CP30307 473 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 RBP5P82980 135 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 TSPY1Q01534 308 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 KCNA1Q09470 495 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 UBXN2BQ14CS0 331 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 SLC39A12Q504Y0 691 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ARHGAP15Q53QZ3 475 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 TPRG1Q6ZUI0 275 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ASCL5Q7RTU5 278 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 DNAJB7Q7Z6W7 309 aaPredicted RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 TMC8Q8IU68 726 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 MFSD6LQ8IWD5 586 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 EFCAB13Q8IY85 973 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 PDILTQ8N807 584 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ATAD1Q8NBU5 361 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 OR10T2Q8NGX3 314 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 SHKBP1Q8TBC3 707 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ZSCAN18Q8TBC5 510 aaPredicted RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 CLDN23Q96B33 292 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 PGLYRP2Q96PD5 576 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 LRRC3Q9BY71 257 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 FOXQ1Q9C009 403 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 TRIM9Q9C026 710 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 DNAJC25Q9H1X3 360 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 ABCB6Q9NP58 842 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 GDAP2Q9NXN4 497 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 TBC1D7Q9P0N9 293 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 CGNQ9P2M7 1197 aaKnown RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 CFAP45Q9UL16 551 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 R3HCC1Q9Y3T6 440 aaKnown RBP8.19□□□□□ -1.1
NPC1-208ENST00000590301 UBE4BO95155 1302 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 WDR87Q6ZQQ6 2873 aa8.19□□□□□ -1.1
NPC1-208ENST00000590301 A0A087X0B3 334 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ZNF233A6NK53 670 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ZNF263O14978 683 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 CHADO15335 359 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 ITGB3P05106 788 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 TMEM191BP0C7N4 346 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 SP9P0CG40 484 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 DDX6P26196 483 aaKnown RBP eCLIP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms