RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
ATG4D-211ENST00000589753 OVOS1Q6IE37 1185 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 TMC6Q7Z403 805 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 OR6B3Q8NGW1 331 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 ARNTL2Q8WYA1 636 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 NLRC4Q9NPP4 1024 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 CHST7Q9NS84 486 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 CISHQ9NSE2 258 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 PLXNA4Q9HCM2 1894 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 TSC2P49815 1807 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 H7C4K7 107 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 GABRDO14764 452 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 OAZ2O95190 189 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 URODP06132 367 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 CDC25BP30305 580 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 DSG1Q02413 1049 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 TRIM14Q14142 442 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 DRAP1Q14919 205 aaPredicted RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 PDXDC1Q6P996 788 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 ANKS3Q6ZW76 656 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 OSTM1Q86WC4 334 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 THEM5Q8N1Q8 247 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 UBR7Q8N806 425 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 POF1BQ8WVV4 589 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 SPAG5Q96R06 1193 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 STK33Q9BYT3 514 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 EDEM3Q9BZQ6 932 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 ZBP1Q9H171 429 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
ATG4D-211ENST00000589753 PCDHB4Q9Y5E5 795 aa16.22■□□□□ 0.19
ATG4D-211ENST00000589753 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 A8MXQ7 604 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 GRM6O15303 877 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 CILPO75339 1184 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 CTSAP10619 480 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 NDST1P52848 882 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 MRPL58Q14197 206 aaKnown RBP16.21■□□□□ 0.19
ATG4D-211ENST00000589753 BMS1Q14692 1282 aaKnown RBP16.21■□□□□ 0.19
ATG4D-211ENST00000589753 KIAA0319Q5VV43 1072 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 SMYD5Q6GMV2 418 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 ZNF280DQ6N043 979 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 TMC7Q7Z402 723 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 UNC93AQ86WB7 457 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 LNX1Q8TBB1 728 aaPredicted RBP16.21■□□□□ 0.19
ATG4D-211ENST00000589753 PIK3R5Q8WYR1 880 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 SHC3Q92529 594 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 ZNF576Q9H609 170 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 TLR9Q9NR96 1032 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 MRPL17Q9NRX2 175 aaKnown RBP16.21■□□□□ 0.19
ATG4D-211ENST00000589753 SSX2IPQ9Y2D8 614 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 STXBP5LQ9Y2K9 1186 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 VWA8A3KMH1 1905 aa16.21■□□□□ 0.19
ATG4D-211ENST00000589753 TMEM265A0A087WTH1 108 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 F8VZ95 297 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 C2CD2LO14523 706 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 GYPCP04921 128 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 TPM1P09493 284 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 KRT5P13647 590 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 DNAJB1P25685 340 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 LMO2P25791 158 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 PCSK1P29120 753 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 USP8P40818 1118 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 JAM2P57087 298 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 PSMD5Q16401 504 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 TMEM270Q6UE05 265 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
ATG4D-211ENST00000589753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.2■□□□□ 0.18
ATG4D-211ENST00000589753 DRC7Q8IY82 874 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 GPR65Q8IYL9 337 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 CPLX3Q8WVH0 158 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
ATG4D-211ENST00000589753 TCF25Q9BQ70 676 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 RTP3Q9BQQ7 232 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 NT5C1AQ9BXI3 368 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 OXCT2Q9BYC2 517 aaPredicted RBP16.2■□□□□ 0.18
ATG4D-211ENST00000589753 GPR88Q9GZN0 384 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 DNAI2Q9GZS0 605 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 ENTPD7Q9NQZ7 604 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 HMGXB4Q9UGU5 601 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 CAPN11Q9UMQ6 739 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 CNTN6Q9UQ52 1028 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
ATG4D-211ENST00000589753 EPOPA6NHQ4 379 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 OR6C75A6NL08 312 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 FOXN3O00409 490 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-211ENST00000589753 HCRTO43612 131 aa16.19■□□□□ 0.18
ATG4D-211ENST00000589753 CXCL14O95715 111 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms