RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 UBASH3AP57075 661 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 MYL6P60660 151 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 NOP14P78316 857 aaKnown RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 BIRC3Q13489 604 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 NCOA4Q13772 614 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 SYCP1Q15431 976 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 UPP1Q16831 310 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 LIMS2Q7Z4I7 341 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 TMEM173Q86WV6 379 aaPredicted RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 VSTM4Q8IW00 320 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 ARHGEF19Q8IW93 802 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 RNF168Q8IYW5 571 aaPredicted RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 LRRC52Q8N7C0 313 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 UBR7Q8N806 425 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 ANKRD20A12PQ8NF67 263 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 BEST2Q8NFU1 509 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 PHOSPHO2Q8TCD6 241 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 URGCPQ8TCY9 931 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 BCL7CQ8WUZ0 217 aaPredicted RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 MRFAP1L1Q96HT8 127 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 PI4K2AQ9BTU6 479 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 INTS2Q9H0H0 1204 aaKnown RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 APOBEC3GQ9HC16 384 aaKnown RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 PLCB1Q9NQ66 1216 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 RAB20Q9NX57 234 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 DPP3Q9NY33 737 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
UCA1-202ENST00000589333 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 MRPL42Q9Y6G3 142 aaKnown RBP6.76□□□□□ -1.33
UCA1-202ENST00000589333 CDH23Q9H251 3354 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PODXLO00592 558 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 XPOTO43592 962 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 ZC3H11AO75152 810 aaKnown RBP eCLIP6.75□□□□□ -1.33
UCA1-202ENST00000589333 UPP2O95045 317 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 GYPCP04921 128 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 BMP2P12643 396 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 ATICP31939 592 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PBX3P40426 434 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 SLC11A1P49279 550 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 MRE11P49959 708 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 UBXN1Q04323 297 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 EXOC3L4Q17RC7 722 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PAN2Q504Q3 1202 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 FIGNQ5HY92 759 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 SPOPLQ6IQ16 392 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PHLDB3Q6NSJ2 640 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 FAM117BQ6P1L5 589 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 GBP6Q6ZN66 633 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 SPRED2Q7Z698 418 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 CREBRFQ8IUR6 639 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 OLIG1Q8TAK6 271 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 CACTINQ8WUQ7 758 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 TAF4BQ92750 862 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 CLP1Q92989 425 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 KAT5Q92993 513 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PDLIM2Q96JY6 352 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 ZNF560Q96MR9 790 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 UROC1Q96N76 676 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 ARID3AQ99856 593 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 TMEM175Q9BSA9 504 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 LSM14BQ9BX40 385 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 VN1R3Q9BXE9 311 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 NAA15Q9BXJ9 866 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 BCO2Q9BYV7 579 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 GPR88Q9GZN0 384 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 MTIF3Q9H2K0 278 aaKnown RBP6.75□□□□□ -1.33
UCA1-202ENST00000589333 KANSL3Q9P2N6 904 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 APEX2Q9UBZ4 518 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 FBXL5Q9UKA1 691 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 NME7Q9Y5B8 376 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 PLXNA3P51805 1871 aa6.75□□□□□ -1.33
UCA1-202ENST00000589333 CHD9Q3L8U1 2897 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 LINC01553A4QN01 128 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 RNF225M0QZC1 329 aaPredicted RBP6.74□□□□□ -1.33
UCA1-202ENST00000589333 M0QZQ0 153 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 NRP1O14786 923 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 ADCY5O95622 1261 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 GALTP07902 379 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 TPM2P07951 284 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 KRT19P08727 400 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 UCHL3P15374 230 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 RFX1P22670 979 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 RPL9P32969 192 aaKnown RBP6.74□□□□□ -1.33
UCA1-202ENST00000589333 PNPLA4P41247 253 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 TAF6P49848 677 aa6.74□□□□□ -1.33
UCA1-202ENST00000589333 FXR1P51114 621 aaKnown RBP eCLIP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms