RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MFSD5Q6N075 450 aa23.74■■□□□ 1.39
ATG4D-209ENST00000588857 NPAS4Q8IUM7 802 aa23.74■■□□□ 1.39
ATG4D-209ENST00000588857 OLIG1Q8TAK6 271 aa23.74■■□□□ 1.39
ATG4D-209ENST00000588857 ATRIPQ8WXE1 791 aa23.74■■□□□ 1.39
ATG4D-209ENST00000588857 FAM193BQ96PV7 902 aaPredicted RBP23.74■■□□□ 1.39
ATG4D-209ENST00000588857 NENFQ9UMX5 172 aa23.74■■□□□ 1.39
ATG4D-209ENST00000588857 CSF2RAP15509 400 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 NDST1P52848 882 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 RAD23BP54727 409 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 TDHQ8IZJ6 230 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 TOP6BLQ8N6T0 577 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 TMEM176AQ96HP8 235 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 RRAGDQ9NQL2 400 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-209ENST00000588857 TFR2Q9UP52 801 aa23.73■■□□□ 1.39
ATG4D-209ENST00000588857 LTBP2Q14767 1821 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 TMCO5BA8MYB1 307 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 CD19P15391 556 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 PAX3P23760 479 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 ARHGAP25P42331 645 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 NYAP1Q6ZVC0 841 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 DPH6Q7L8W6 267 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 PALB2Q86YC2 1186 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 WHAMMQ8TF30 809 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 ZNF606Q8WXB4 792 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 RABGGTAQ92696 567 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 MRPL45Q9BRJ2 306 aaKnown RBP23.72■■□□□ 1.39
ATG4D-209ENST00000588857 NT5C1AQ9BXI3 368 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 DNAI2Q9GZS0 605 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 TBC1D13Q9NVG8 400 aa23.72■■□□□ 1.39
ATG4D-209ENST00000588857 ABHD14A-ACY1A0A1B0GW23 586 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 RCCD1A6NED2 376 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 CYB561D2O14569 222 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 TACC1O75410 805 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 B3GAT3O94766 335 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 H2AFZP0C0S5 128 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 GZMAP12544 262 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 DSTYKQ6XUX3 929 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 TRIM72Q6ZMU5 477 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 H2AFVQ71UI9 128 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 SLC4A11Q8NBS3 891 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 OR6B3Q8NGW1 331 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 RSPH1Q8WYR4 309 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 PCDHB18PQ96TA0 734 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 PAAF1Q9BRP4 392 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 ELOVL4Q9GZR5 314 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 LACRTQ9GZZ8 138 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 SNX25Q9H3E2 840 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 HMGXB4Q9UGU5 601 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 GUCA1BQ9UMX6 200 aa23.71■■□□□ 1.39
ATG4D-209ENST00000588857 FNDC1Q4ZHG4 1894 aaPredicted RBP23.71■■□□□ 1.39
ATG4D-209ENST00000588857 KIF2AO00139 706 aaPredicted RBP23.7■■□□□ 1.38
ATG4D-209ENST00000588857 PJA2O43164 708 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 MED7O43513 233 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 PFKMP08237 780 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 BRD2P25440 801 aaKnown RBP23.7■■□□□ 1.38
ATG4D-209ENST00000588857 DNTTIP2Q5QJE6 756 aaKnown RBP23.7■■□□□ 1.38
ATG4D-209ENST00000588857 DCLRE1AQ6PJP8 1040 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 UNC93AQ86WB7 457 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 ZNF280BQ86YH2 543 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 CRIPAKQ8N1N5 446 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 VWCEQ96DN2 955 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 SENP8Q96LD8 212 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 TWNKQ96RR1 684 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 INTUQ9ULD6 942 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 KIAA1257Q9ULG3 409 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 L1RE1Q9UN81 338 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 ATP8B3O60423 1300 aa23.7■■□□□ 1.38
ATG4D-209ENST00000588857 KIF5CO60282 957 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 RTN2O75298 545 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 FAM163BP0C2L3 166 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 DSC1Q08554 894 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 ORC1Q13415 861 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.69■■□□□ 1.38
ATG4D-209ENST00000588857 LIMS2Q7Z4I7 341 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 ADGRF2Q8IZF7 708 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 C3orf58Q8NDZ4 430 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 HEXIM2Q96MH2 286 aaKnown RBP23.69■■□□□ 1.38
ATG4D-209ENST00000588857 CASD1Q96PB1 797 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 PACSIN1Q9BY11 444 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 MRPL9Q9BYD2 267 aaKnown RBP23.69■■□□□ 1.38
ATG4D-209ENST00000588857 TAS2R14Q9NYV8 317 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 TRIM10Q9UDY6 481 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 A8MXQ7 604 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 EFCAB14O75071 495 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 DDHD2O94830 711 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 ABL1P00519 1130 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 FTLP02792 175 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-209ENST00000588857 TUBB4AP04350 444 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 TNNT1P13805 278 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 GNL1P36915 607 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-209ENST00000588857 CLEC16AQ2KHT3 1053 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 COLGALT2Q8IYK4 626 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 PDCL2Q8N4E4 241 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 KBTBD7Q8WVZ9 684 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 ISCUQ9H1K1 167 aa23.69■■□□□ 1.38
ATG4D-209ENST00000588857 LAMA3Q16787 3333 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 UPP2O95045 317 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 AMHP03971 560 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 VDRP11473 427 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 IGFBP6P24592 240 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms