RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 FSTL1Q12841 308 aa8.82□□□□□ -1
VMP1-208ENST00000588617 SLC29A2Q14542 456 aa8.82□□□□□ -1
VMP1-208ENST00000588617 MFSD14BQ5SR56 506 aa8.82□□□□□ -1
VMP1-208ENST00000588617 SEM1Q6ZVN7 128 aa8.82□□□□□ -1
VMP1-208ENST00000588617 LDHDQ86WU2 507 aa8.82□□□□□ -1
VMP1-208ENST00000588617 CPOQ8IVL8 374 aa8.82□□□□□ -1
VMP1-208ENST00000588617 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
VMP1-208ENST00000588617 ZNF384Q8TF68 577 aa8.82□□□□□ -1
VMP1-208ENST00000588617 CFHR4Q92496 578 aa8.82□□□□□ -1
VMP1-208ENST00000588617 ERP27Q96DN0 273 aa8.82□□□□□ -1
VMP1-208ENST00000588617 CEP95Q96GE4 821 aa8.82□□□□□ -1
VMP1-208ENST00000588617 NOX5Q96PH1 765 aa8.82□□□□□ -1
VMP1-208ENST00000588617 MRI1Q9BV20 369 aa8.82□□□□□ -1
VMP1-208ENST00000588617 PCDHAC1Q9H158 963 aa8.82□□□□□ -1
VMP1-208ENST00000588617 TBC1D22BQ9NU19 505 aa8.82□□□□□ -1
VMP1-208ENST00000588617 USP40Q9NVE5 1235 aa8.82□□□□□ -1
VMP1-208ENST00000588617 SIRT5Q9NXA8 310 aa8.82□□□□□ -1
VMP1-208ENST00000588617 FEM1BQ9UK73 627 aa8.82□□□□□ -1
VMP1-208ENST00000588617 ZMYND8Q9ULU4 1186 aaPredicted RBP8.82□□□□□ -1
VMP1-208ENST00000588617 CTDP1Q9Y5B0 961 aaPredicted RBP8.82□□□□□ -1
VMP1-208ENST00000588617 ZMYM3Q14202 1370 aa8.82□□□□□ -1
VMP1-208ENST00000588617 B4E171 279 aa8.81□□□□□ -1
VMP1-208ENST00000588617 NRP1O14786 923 aa8.81□□□□□ -1
VMP1-208ENST00000588617 FAM155BO75949 473 aa8.81□□□□□ -1
VMP1-208ENST00000588617 GYS1P13807 737 aa8.81□□□□□ -1
VMP1-208ENST00000588617 TSPAN7P41732 249 aa8.81□□□□□ -1
VMP1-208ENST00000588617 TLE2Q04725 743 aa8.81□□□□□ -1
VMP1-208ENST00000588617 TRPC3Q13507 836 aa8.81□□□□□ -1
VMP1-208ENST00000588617 MAPKAPK3Q16644 382 aa8.81□□□□□ -1
VMP1-208ENST00000588617 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
VMP1-208ENST00000588617 CRTC1Q6UUV9 634 aa8.81□□□□□ -1
VMP1-208ENST00000588617 ZDHHC24Q6UX98 284 aa8.81□□□□□ -1
VMP1-208ENST00000588617 USP37Q86T82 979 aa8.81□□□□□ -1
VMP1-208ENST00000588617 PDSS2Q86YH6 399 aa8.81□□□□□ -1
VMP1-208ENST00000588617 FLAD1Q8NFF5 587 aa8.81□□□□□ -1
VMP1-208ENST00000588617 AFG1LQ8WV93 481 aa8.81□□□□□ -1
VMP1-208ENST00000588617 SNRNP27Q8WVK2 155 aaKnown RBP8.81□□□□□ -1
VMP1-208ENST00000588617 RAPGEF4Q8WZA2 1011 aa8.81□□□□□ -1
VMP1-208ENST00000588617 DDX17Q92841 729 aaKnown RBP8.81□□□□□ -1
VMP1-208ENST00000588617 LPPQ93052 612 aa8.81□□□□□ -1
VMP1-208ENST00000588617 SLC7A6OSQ96CW6 309 aaPredicted RBP8.81□□□□□ -1
VMP1-208ENST00000588617 NELL2Q99435 816 aa8.81□□□□□ -1
VMP1-208ENST00000588617 ZNF552Q9H707 407 aaPredicted RBP8.81□□□□□ -1
VMP1-208ENST00000588617 SEPSECSQ9HD40 501 aaKnown RBP8.81□□□□□ -1
VMP1-208ENST00000588617 JKAMPQ9P055 326 aa8.81□□□□□ -1
VMP1-208ENST00000588617 NCDNQ9UBB6 729 aa8.81□□□□□ -1
VMP1-208ENST00000588617 SLC45A2Q9UMX9 530 aa8.81□□□□□ -1
VMP1-208ENST00000588617 TBC1D30Q9Y2I9 924 aa8.81□□□□□ -1
VMP1-208ENST00000588617 KCNQ3O43525 872 aa8.8□□□□□ -1
VMP1-208ENST00000588617 USP1O94782 785 aa8.8□□□□□ -1
VMP1-208ENST00000588617 INMTO95050 263 aa8.8□□□□□ -1
VMP1-208ENST00000588617 JUNP05412 331 aaKnown RBP8.8□□□□□ -1
VMP1-208ENST00000588617 VSIG10L2P0DP72 767 aa8.8□□□□□ -1
VMP1-208ENST00000588617 ACVR2AP27037 513 aa8.8□□□□□ -1
VMP1-208ENST00000588617 CST5P28325 142 aaPredicted RBP8.8□□□□□ -1
VMP1-208ENST00000588617 SLC6A4P31645 630 aa8.8□□□□□ -1
VMP1-208ENST00000588617 BPIFB4P59827 614 aa8.8□□□□□ -1
VMP1-208ENST00000588617 TMTC4Q5T4D3 741 aa8.8□□□□□ -1
VMP1-208ENST00000588617 ARTNQ5T4W7 220 aa8.8□□□□□ -1
VMP1-208ENST00000588617 USP17L6PQ6QN14 398 aa8.8□□□□□ -1
VMP1-208ENST00000588617 KIAA0408Q6ZU52 694 aa8.8□□□□□ -1
VMP1-208ENST00000588617 ZNF365Q70YC5 407 aa8.8□□□□□ -1
VMP1-208ENST00000588617 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
VMP1-208ENST00000588617 ZNF605Q86T29 641 aa8.8□□□□□ -1
VMP1-208ENST00000588617 HERC6Q8IVU3 1022 aa8.8□□□□□ -1
VMP1-208ENST00000588617 NLGN4YQ8NFZ3 816 aaPredicted RBP8.8□□□□□ -1
VMP1-208ENST00000588617 ZCCHC14Q8WYQ9 949 aaKnown RBP8.8□□□□□ -1
VMP1-208ENST00000588617 HERVK_113Q902F9 699 aa8.8□□□□□ -1
VMP1-208ENST00000588617 ZBTB8AQ96BR9 441 aa8.8□□□□□ -1
VMP1-208ENST00000588617 LIN37Q96GY3 246 aaPredicted RBP8.8□□□□□ -1
VMP1-208ENST00000588617 NDC1Q9BTX1 674 aa8.8□□□□□ -1
VMP1-208ENST00000588617 XPR1Q9UBH6 696 aa8.8□□□□□ -1
VMP1-208ENST00000588617 RGS17Q9UGC6 210 aaPredicted RBP8.8□□□□□ -1
VMP1-208ENST00000588617 MTO1Q9Y2Z2 717 aaKnown RBP8.8□□□□□ -1
VMP1-208ENST00000588617 HS3ST4Q9Y661 456 aa8.8□□□□□ -1
VMP1-208ENST00000588617 M0QYG6 137 aa8.79□□□□□ -1
VMP1-208ENST00000588617 ACTL6BO94805 426 aa8.79□□□□□ -1
VMP1-208ENST00000588617 SASH1O94885 1247 aa8.79□□□□□ -1
VMP1-208ENST00000588617 NPPBP16860 134 aa8.79□□□□□ -1
VMP1-208ENST00000588617 EGR1P18146 543 aa8.79□□□□□ -1
VMP1-208ENST00000588617 IL13P35225 146 aa8.79□□□□□ -1
VMP1-208ENST00000588617 ZNF135P52742 658 aaPredicted RBP8.79□□□□□ -1
VMP1-208ENST00000588617 ATP2C1P98194 919 aaPredicted RBP8.79□□□□□ -1
VMP1-208ENST00000588617 CUL4BQ13620 913 aa8.79□□□□□ -1
VMP1-208ENST00000588617 EFR3AQ14156 821 aa8.79□□□□□ -1
VMP1-208ENST00000588617 ACAP1Q15027 740 aa8.79□□□□□ -1
VMP1-208ENST00000588617 CRB2Q5IJ48 1285 aa8.79□□□□□ -1
VMP1-208ENST00000588617 FAM26FQ5R3K3 315 aa8.79□□□□□ -1
VMP1-208ENST00000588617 CCDC30Q5VVM6 783 aa8.79□□□□□ -1
VMP1-208ENST00000588617 RAP1GAP2Q684P5 730 aa8.79□□□□□ -1
VMP1-208ENST00000588617 ZNF529Q6P280 563 aa8.79□□□□□ -1
VMP1-208ENST00000588617 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
VMP1-208ENST00000588617 HTRA1Q92743 480 aa8.79□□□□□ -1
VMP1-208ENST00000588617 NUDT11Q96G61 164 aa8.79□□□□□ -1
VMP1-208ENST00000588617 KCNC2Q96PR1 638 aa8.79□□□□□ -1
VMP1-208ENST00000588617 KIAA1683Q9H0B3 1180 aa8.79□□□□□ -1
VMP1-208ENST00000588617 KCNH6Q9H252 994 aa8.79□□□□□ -1
VMP1-208ENST00000588617 JMJD4Q9H9V9 463 aa8.79□□□□□ -1
VMP1-208ENST00000588617 GPR35Q9HC97 309 aa8.79□□□□□ -1
VMP1-208ENST00000588617 PCDHA5Q9Y5H7 936 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms