RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 TMEM270Q6UE05 265 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 ANKS3Q6ZW76 656 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 CCDC170Q8IYT3 715 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 TDHQ8IZJ6 230 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 CRYBG2Q8N1P7 616 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 SLC39A11Q8N1S5 342 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 TXLNBQ8N3L3 684 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 CPLX3Q8WVH0 158 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 ACBD6Q9BR61 282 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 C11orf84Q9BUA3 381 aaPredicted RBP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 LUC7LQ9NQ29 371 aaKnown RBP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 DNAJB4Q9UDY4 337 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 PCDHB4Q9Y5E5 795 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
CLPTM1-207ENST00000587537 OR6C75A6NL08 312 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 FOXN3O00409 490 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 PPEF2O14830 753 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 SPTLC1O15269 473 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 IPO7O95373 1038 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 EFEMP2O95967 443 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 C1RP00736 705 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 SOD2P04179 222 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 VDRP11473 427 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 FGFR3P22607 806 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 CYLC1P35663 651 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 BMPR1AP36894 532 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 GATMP50440 423 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 SNX16P57768 344 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 TSPY1Q01534 308 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 YWHAHQ04917 246 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 KLHL30Q0D2K2 578 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 SHHQ15465 462 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 OVOS1Q6IE37 1185 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 ZNF280DQ6N043 979 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 DCP1BQ8IZD4 617 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 OR6B3Q8NGW1 331 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 BAG1Q99933 345 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 TTPALQ9BTX7 342 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 ZNF518BQ9C0D4 1074 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 GPR88Q9GZN0 384 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 CEP83Q9Y592 693 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 NLRC5Q86WI3 1866 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 ATP8B3O60423 1300 aa11.03□□□□□ -0.64
CLPTM1-207ENST00000587537 TSC2P49815 1807 aa11.02□□□□□ -0.64
CLPTM1-207ENST00000587537 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
CLPTM1-207ENST00000587537 A8MXQ7 604 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 ARHGAP6O43182 974 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 LRRN2O75325 713 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 LSM8O95777 96 aaKnown RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 CD58P19256 250 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 GNA15P30679 374 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 USP8P40818 1118 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 NDST1P52848 882 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 SLC8A3P57103 927 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 SMAD3P84022 425 aaKnown RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 C10orf76Q5T2E6 689 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 GJB7Q6PEY0 223 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 CD300LGQ6UXG3 332 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 SCARA5Q6ZMJ2 495 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 IRF2BP2Q7Z5L9 587 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 LRRC8AQ8IWT6 810 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 MSANTD4Q8NCY6 345 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 FAM84AQ96KN4 292 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 ARID3AQ99856 593 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 PAAF1Q9BRP4 392 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 MIS12Q9H081 205 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 CHST7Q9NS84 486 aa11.02□□□□□ -0.65
CLPTM1-207ENST00000587537 POLIQ9UNA4 740 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms