RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 USP29Q9HBJ7 922 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 PLK2Q9NYY3 685 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CLIC5Q9NZA1 410 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 TRIM33Q9UPN9 1127 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CEP290O15078 2479 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CYP2D7A0A087X1C5 515 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CENPBD1B2RD01 187 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 NT5C2P49902 561 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 PPARAQ07869 468 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 KCNA1Q09470 495 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 TGFBIQ15582 683 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 NIPAL1Q6NVV3 410 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 TUBA3EQ6PEY2 450 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CCDC81Q6ZN84 652 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 C4orf50Q6ZRC1 276 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 ITIH5Q86UX2 942 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 SPARTQ8N0X7 666 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 ALLCQ8N6M5 410 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 NRG4Q8WWG1 115 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 TRIB2Q92519 343 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 SGF29Q96ES7 293 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 PRICKLE1Q96MT3 831 aaPredicted RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CEP63Q96MT8 703 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 TBC1D10AQ9BXI6 508 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 ZDHHC7Q9NXF8 308 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 KLHL3Q9UH77 587 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 KIAA1257Q9ULG3 409 aa10.48□□□□□ -0.73
ZNF540-203ENST00000586134 NOSIPQ9Y314 301 aaKnown RBP10.48□□□□□ -0.73
ZNF540-203ENST00000586134 CPLX1O14810 134 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 HAT1O14929 419 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 ZNF862O60290 1169 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 OPHN1O60890 802 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 SLC25A27O95847 323 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 TGFB3P10600 412 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 EEF2P13639 858 aaKnown RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 CRABP2P29373 138 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 VPS41P49754 854 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 RPS3AP61247 264 aaKnown RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 VSIG1Q86XK7 387 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 OR2W6PQ8NHA6 318 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 UBLCP1Q8WVY7 318 aaPredicted RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 PRMT1Q99873 361 aaKnown RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 DDX50Q9BQ39 737 aaKnown RBP10.47□□□□□ -0.73
ZNF540-203ENST00000586134 SELENOSQ9BQE4 189 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 SPATC1LQ9H0A9 340 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 MKNK2Q9HBH9 465 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 TCP11L1Q9NUJ3 509 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 TBC1D23Q9NUY8 699 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 SQORQ9Y6N5 450 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 ZNF536O15090 1300 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 LAMA4Q16363 1823 aa10.47□□□□□ -0.73
ZNF540-203ENST00000586134 A0A1W2PQC6 194 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 E9PMD0 336 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 CAPN9O14815 690 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 ENTPD5O75356 428 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 PEX14O75381 377 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 TRMUO75648 421 aaKnown RBP10.46□□□□□ -0.73
ZNF540-203ENST00000586134 PSMG1O95456 288 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 NUDT17P0C025 328 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 COG7P83436 770 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 XIAPP98170 497 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 DENND2CQ68D51 928 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 ENAHQ8N8S7 591 aaPredicted RBP10.46□□□□□ -0.73
ZNF540-203ENST00000586134 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 CALML6Q8TD86 181 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 STMN2Q93045 179 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 MED15Q96RN5 788 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 ECSITQ9BQ95 431 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 LACRTQ9GZZ8 138 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 DDX47Q9H0S4 455 aaKnown RBP10.46□□□□□ -0.73
ZNF540-203ENST00000586134 FBXL5Q9UKA1 691 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 KCNH3Q9ULD8 1083 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 CAPN11Q9UMQ6 739 aa10.46□□□□□ -0.73
ZNF540-203ENST00000586134 LINC00854A0A1B0GVQ3 168 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 A8MXQ7 604 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 CES2O00748 559 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 SNX2O60749 519 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 B3GALNT1O75752 331 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 CTDNEP1O95476 244 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 FDX1P10109 184 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 M6PRP20645 277 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 CYP2B6P20813 491 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 PTPN4P29074 926 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 KRT6CP48668 564 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 AP3M2P53677 418 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 COX10Q12887 443 aa10.46□□□□□ -0.74
ZNF540-203ENST00000586134 DPYSQ14117 519 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms