RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 NLRC5Q86WI3 1866 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ZNF677Q86XU0 584 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HASPINQ8TF76 798 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SYT11Q9BT88 431 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 DNAI2Q9GZS0 605 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HMGXB4Q9UGU5 601 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 NOCTQ9UK39 431 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PCDHB8Q9UN66 801 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 F8W810 466 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 GABRDO14764 452 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CYP11B1P15538 503 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 IGFBP6P24592 240 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BRCC3P46736 316 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 NDST1P52848 882 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 GPIHBP1Q8IV16 184 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CCDC170Q8IYT3 715 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 WHAMMQ8TF30 809 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 RNPC3Q96LT9 517 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ZNF558Q96NG5 402 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 RAD9AQ99638 391 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 NT5C1AQ9BXI3 368 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ELOVL4Q9GZR5 314 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SOWAHDA6NJG2 315 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TADA2AO75478 443 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SKILP12757 684 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GNA15P30679 374 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PPM1AP35813 382 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LHX1P48742 406 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ALDH7A1P49419 539 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RAD23BP54727 409 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 C9orf50Q5SZB4 431 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 WSCD1Q658N2 575 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 FUT10Q6P4F1 479 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 KCNT2Q6UVM3 1135 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC47A2Q86VL8 602 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 VPS36Q86VN1 386 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OSTM1Q86WC4 334 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 METTL23Q86XA0 190 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC4A11Q8NBS3 891 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TWNKQ96RR1 684 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CHP1Q99653 195 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GDF15Q99988 308 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZBED2Q9BTP6 218 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SNX25Q9H3E2 840 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NHEJ1Q9H9Q4 299 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 AAASQ9NRG9 546 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 STXBP5LQ9Y2K9 1186 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NME7Q9Y5B8 376 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GBF1Q92538 1859 aa17.83■□□□□ 0.44
CDK5RAP3-230ENST00000584042 I3L4J1 428 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TLL1O43897 1013 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 EFEMP2O95967 443 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CYLC1P35663 651 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 EIF4A3P38919 411 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 KIF11P52732 1056 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 BMS1Q14692 1282 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ASTE1Q2TB18 679 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZNF571Q7Z3V5 609 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC39A11Q8N1S5 342 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 FIBCD1Q8N539 461 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OR6B3Q8NGW1 331 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TMEM176AQ96HP8 235 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 IGSF21Q96ID5 467 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
CDK5RAP3-230ENST00000584042 A8MXQ7 604 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PCSK1P29120 753 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GNL1P36915 607 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PBX3P40426 434 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CDR2Q01850 454 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZNF394Q53GI3 561 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC20A1Q8WUM9 679 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DDX1Q92499 740 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TNIP3Q96KP6 325 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CCDC42Q96M95 316 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 AGPAT1Q99943 283 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DDX43Q9NXZ2 648 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 KIAA1257Q9ULG3 409 aa17.81■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ATP8B3O60423 1300 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 AKR1B10O60218 316 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LCA5LO95447 670 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 VDRP11473 427 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 FGFR3P22607 806 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TKTP29401 623 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RGS19P49795 217 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms