RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-227	ENST00000583988	TP53BP2	Q13625	1128 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HABP2	Q14520	560 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KHDC1L	Q5JSQ8	128 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988		Q6YL49	198 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CCDC149	Q6ZUS6	474 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZNF575	Q86XF7	245 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PPP1R3B	Q86XI6	285 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KRT78	Q8N1N4	520 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SH2D3C	Q8N5H7	860 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FAM156A	Q8NDB6	213 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PJA1	Q8NG27	643 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CAVIN3	Q969G5	261 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	BOD1	Q96IK1	185 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KLHL32	Q96NJ5	620 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	C1orf43	Q9BWL3	253 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	LRRC27	Q9C0I9	530 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	NUP62CL	Q9H1M0	184 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TOR3A	Q9H497	397 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RGS17	Q9UGC6	210 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TPCN1	Q9ULQ1	816 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MED16	Q9Y2X0	877 aa		4.95	□□□□□ -1.62
PPP4R1-227	ENST00000583988	AATK	Q6ZMQ8	1374 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MYADML2	A6NDP7	307 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PLIN1	O60240	522 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MGEA5	O60502	916 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	GPANK1	O95872	356 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	GNAI2	P04899	355 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	GJB1	P08034	283 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RARB	P10826	455 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MYF5	P13349	255 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FGFR4	P22455	802 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	POU6F2	P78424	691 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	GALE	Q14376	348 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KIAA0753	Q2KHM9	967 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PPP4R4	Q6NUP7	873 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	DPY19L2P1	Q6NXN4	242 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988		Q8NA96	180 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SLC17A8	Q8NDX2	589 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	LRTOMT	Q8WZ04	291 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TNPO1	Q92973	898 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	APIP	Q96GX9	242 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MRGPRX1	Q96LB2	322 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZSWIM1	Q9BR11	485 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	C22orf23	Q9BZE7	217 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	DPH1	Q9BZG8	443 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	BTBD1	Q9H0C5	482 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RSAD1	Q9HA92	442 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TMEM74B	Q9NUR3	256 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	VSX1	Q9NZR4	365 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RNF181	Q9P0P0	153 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HSFX1	Q9UBD0	423 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PCDHA1	Q9Y5I3	950 aa		4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CCDC194	A0A1B0GVG4	234 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CFAP69	A5D8W1	941 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988		E7ENX8	843 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MYO1F	O00160	1098 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SOAT2	O75908	522 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SPDEF	O95238	335 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FCER1A	P12319	257 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TGM1	P22735	817 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ADRA1B	P35368	520 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ARFIP2	P53365	341 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SOX8	P57073	446 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HSD11B2	P80365	405 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TAP1	Q03518	808 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TAP2	Q03519	686 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PIGF	Q07326	219 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	LLGL1	Q15334	1064 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SPDYE7P	Q495Y7	208 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FOXR2	Q6PJQ5	311 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	OLFML1	Q6UWY5	402 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CFAP52	Q8N1V2	620 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TMIE	Q8NEW7	156 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	IL31RA	Q8NI17	732 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FUBP1	Q96AE4	644 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	NACC2	Q96BF6	587 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TIFA	Q96CG3	184 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ADAM2	Q99965	735 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TLR10	Q9BXR5	811 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	IMPG2	Q9BZV3	1241 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ATP6V0A4	Q9HBG4	840 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KCNE5	Q9UJ90	142 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PLEKHM1	Q9Y4G2	1056 aa		4.93	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZAR1L	A6NP61	321 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KIAA0355	O15063	1070 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CDKL5	O76039	1030 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	AHSG	P02765	367 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ITGAM	P11215	1152 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	EN2	P19622	333 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PHKA1	P46020	1223 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	AVPR1B	P47901	424 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CXADR	P78310	365 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HDAC1	Q13547	482 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CYP2A13	Q16696	494 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	AMOT	Q4VCS5	1084 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	COBLL1	Q53SF7	1204 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	APOA5	Q6Q788	366 aa		4.92	□□□□□ -1.62

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