RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 USP17L13C9JLJ4 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L11C9JVI0 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L18D6R9N7 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L22D6RA61 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L17D6RBQ6 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L19D6RCP7 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L20D6RJB6 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 H7C0C1 242 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 KMOO15229 486 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 BMP3P12645 472 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ACADSP16219 412 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CDC25CP30307 473 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ATP5OP48047 213 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SCNN1BP51168 640 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ARFIP2P53365 341 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SLC16A1P53985 500 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ALDH18A1P54886 795 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 GPC5P78333 572 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 PRAMEP78395 509 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L24Q0WX57 530 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RUNDC3AQ59EK9 446 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TEDDM1Q5T9Z0 273 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L6PQ6QN14 398 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 GATAD2BQ8WXI9 593 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 E2F7Q96AV8 911 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TBATAQ96M53 351 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ADI1Q9BV57 179 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 AGXT2Q9BYV1 514 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 MRPL47Q9HD33 250 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TUBA8Q9NY65 449 aaPredicted RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 DCAF4L1Q3SXM0 396 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TSPAN14Q8NG11 270 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CELF1Q92879 486 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 EXT2Q93063 718 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SAYSD1Q9NPB0 183 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 EURLQ9NYK6 297 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ANKRD6Q9Y2G4 727 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 UBE4BO95155 1302 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 BRAFP15056 766 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SP100P23497 879 aaPredicted RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 GTF2E2P29084 291 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 HOXA13P31271 388 aaPredicted RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 BYSLQ13895 437 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 PTGISQ16647 500 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ARHGEF16Q5VV41 709 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RASSF6Q6ZTQ3 369 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RAB11FIP2Q7L804 512 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CYGBQ8WWM9 190 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TRIM51Q9BSJ1 452 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CAPN10Q9HC96 672 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 STK32BQ9NY57 414 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CNOT8Q9UFF9 292 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ATP8B3O60423 1300 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 A6NJR5 290 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 B2RBV5 119 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TCP10L2B9ZVM9 353 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ALDH1A2O94788 518 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 FCHO2Q0JRZ9 810 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 DRAP1Q14919 205 aaPredicted RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 KLC3Q6P597 504 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CLYBLQ8N0X4 340 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 UXS1Q8NBZ7 420 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CALML6Q8TD86 181 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 NARS2Q96I59 477 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 XPO6Q96QU8 1125 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 BTBD7Q9P203 1132 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ANAPC7Q9UJX3 599 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ASNA1O43681 348 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CHN1P15882 459 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ALDH1B1P30837 517 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 COPB2P35606 906 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 KLK7P49862 253 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RAB2AP61019 212 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 DYNLT1P63172 113 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CDC16Q13042 620 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 PPP1R2P3Q6NXS1 205 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ARL8AQ96BM9 186 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 LRCH1Q9Y2L9 728 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ADGRB1O14514 1584 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 HNRNPRO43390 633 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RAD51CO43502 376 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 SORBS3O60504 671 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 ACTN1P12814 892 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 MPP2Q14168 576 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TBC1D9BQ66K14 1250 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 PLEKHA7Q6IQ23 1121 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 TMEM110Q86TL2 294 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 HEMGNQ9BXL5 484 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 KMT5AQ9NQR1 393 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 INO80Q9ULG1 1556 aaPredicted RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 MGAT4AQ9UM21 535 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 PRELID1Q9Y255 219 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 DTNAQ9Y4J8 743 aa7.78□□□□□ -1.16
CMTM4-205ENST00000581487 RBM7Q9Y580 266 aaKnown RBP7.78□□□□□ -1.16
CMTM4-205ENST00000581487 CDC42BPBQ9Y5S2 1711 aa7.77□□□□□ -1.16
CMTM4-205ENST00000581487 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms