RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 SMG5Q9UPR3 1016 aaKnown RBP14.81□□□□□ -0.04
CCDC40-216ENST00000576241 MRPS17Q9Y2R5 130 aaKnown RBP14.81□□□□□ -0.04
CCDC40-216ENST00000576241 MYH15Q9Y2K3 1946 aa14.81□□□□□ -0.04
CCDC40-216ENST00000576241 K7ELQ4 463 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 PIRO00625 290 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 NCAM2O15394 837 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 LAMTOR5O43504 91 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 PPP1R37O75864 691 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 IL18RAPO95256 599 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 GCNT3O95395 438 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 CYP11A1P05108 521 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 IDEP14735 1019 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 GJA1P17302 382 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 TAF6P49848 677 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ALCAMQ13740 583 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 SLC39A14Q15043 492 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ZNF528Q3MIS6 628 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 CENPPQ6IPU0 288 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 POTEHQ6S545 545 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 SYCP3Q8IZU3 236 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ATAD1Q8NBU5 361 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ZSCAN18Q8TBC5 510 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 DEPDC1BQ8WUY9 529 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ATRIPQ8WXE1 791 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 IRF7Q92985 503 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 DNAJC19Q96DA6 116 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 BORCS6Q96GS4 357 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ZSWIM3Q96MP5 696 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 USP28Q96RU2 1077 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 PYM1Q9BRP8 204 aaKnown RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 OLFML3Q9NRN5 406 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 HEBP1Q9NRV9 189 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 TBC1D7Q9P0N9 293 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ANGPTL2Q9UKU9 493 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 MTMR6Q9Y217 621 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 MTF2Q9Y483 593 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ASB3Q9Y575 518 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 PCDHB13Q9Y5F0 798 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 MORC2Q9Y6X9 1032 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 SETXQ7Z333 2677 aaKnown RBP14.8□□□□□ -0.04
CCDC40-216ENST00000576241 NOTCH4Q99466 2003 aa14.8□□□□□ -0.04
CCDC40-216ENST00000576241 ASPMQ8IZT6 3477 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 A0A1W2PRU2 124 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 MTMR11A4FU01 709 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 MAN2B1O00754 1011 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 NRG2O14511 850 aaPredicted RBP14.79□□□□□ -0.04
CCDC40-216ENST00000576241 CYB561D2O14569 222 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 STX6O43752 255 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 MOSPD3O75425 235 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 VNN2O95498 520 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 FGF19O95750 216 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 PSMC3P17980 439 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 VEPH1Q14D04 833 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 TEAD2Q15562 447 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 SV2CQ496J9 727 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 SLC39A12Q504Y0 691 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 MIA3Q5JRA6 1907 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 FRYQ5TBA9 3013 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 VITQ6UXI7 678 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 ITIH5Q86UX2 942 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 SHKBP1Q8TBC3 707 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 E2F7Q96AV8 911 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 ZNF560Q96MR9 790 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 FAM213AQ9BRX8 229 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 STRA6Q9BX79 667 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 CEP295Q9C0D2 2601 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 IKZF4Q9H2S9 585 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 CRISPLD1Q9H336 500 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 TRPV4Q9HBA0 871 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 HSFX1Q9UBD0 423 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 PCDHGA2Q9Y5H1 932 aa14.79□□□□□ -0.04
CCDC40-216ENST00000576241 CNOT1A5YKK6 2376 aaKnown RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 SLC30A4O14863 429 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 ZNF263O14978 683 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 LDHAP00338 332 aaKnown RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 TARSP26639 723 aaKnown RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 ADSSP30520 456 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 GDI1P31150 447 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 PNPLA4P41247 253 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 VIPR2P41587 438 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 TUFMP49411 452 aaKnown RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 KCNA1Q09470 495 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 STK38Q15208 465 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 MGAT5BQ3V5L5 792 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 CRELD2Q6UXH1 353 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 TMC8Q8IU68 726 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 YAF2Q8IY57 180 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 EFCAB13Q8IY85 973 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 TTC9BQ8N6N2 239 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 OR10T2Q8NGX3 314 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 FAM200AQ8TCP9 573 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 PSMG2Q969U7 264 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 SEPT5Q99719 369 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-216ENST00000576241 BACH2Q9BYV9 841 aa14.78□□□□□ -0.04
CCDC40-216ENST00000576241 PANK2Q9BZ23 570 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms