RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CES5AQ6NT32 575 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CCDC149Q6ZUS6 474 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 TRAPPC11Q7Z392 1133 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ADSSL1Q8N142 457 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 APPL2Q8NEU8 664 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MKNK1Q9BUB5 465 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 SDCBP2Q9H190 292 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 KIAA1586Q9HCI6 787 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MAN1B1Q9UKM7 699 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 AGAP1Q9UPQ3 857 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MAPK8IP1Q9UQF2 711 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MYH10P35580 1976 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 FAM86C2PA6NEL3 165 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 OR6C75A6NL08 312 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 H7C4K7 107 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 CYB561D2O14569 222 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 TADA3O75528 432 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 SOAT2O75908 522 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 CEBPBP17676 345 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 PPP3CAQ08209 521 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 ADCY1Q08828 1119 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 HTR4Q13639 388 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 MORC3Q14149 939 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 EDRF1Q3B7T1 1238 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 SV2CQ496J9 727 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 ZNF658Q5TYW1 1059 aaPredicted RBP9.34□□□□□ -0.91
SMG6-216ENST00000575176 RTL10Q7L3V2 364 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 GRASPQ7Z6J2 395 aaPredicted RBP9.34□□□□□ -0.91
SMG6-216ENST00000575176 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 ATAD1Q8NBU5 361 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 GOLGA5Q8TBA6 731 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 TCEAL4Q96EI5 215 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 PGLYRP2Q96PD5 576 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 GSDMAQ96QA5 445 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 DUSP9Q99956 384 aaKnown RBP9.34□□□□□ -0.91
SMG6-216ENST00000575176 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 ZNF334Q9HCZ1 680 aaPredicted RBP9.34□□□□□ -0.91
SMG6-216ENST00000575176 CRTAC1Q9NQ79 661 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
SMG6-216ENST00000575176 SHISA7A6NL88 538 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 EXOC3O60645 756 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 GPR37L1O60883 481 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 RHOP08100 348 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TMEM191BP0C7N4 346 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TRIM49P0CI25 452 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TRIM49CP0CI26 452 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 DLATP10515 647 aaKnown RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 NR2F2P24468 414 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 SSTR3P32745 418 aaPredicted RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 PNPLA4P41247 253 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 ASPAP45381 313 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 CDR1P51861 262 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 MYL6P60660 151 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 ZXDAP98168 799 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 ENPEPQ07075 957 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 PPM1LQ5SGD2 360 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 ATAT1Q5SQI0 421 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 IER5LQ5T953 404 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 FAM171BQ6P995 826 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 DSTYKQ6XUX3 929 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 GET4Q7L5D6 327 aaPredicted RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 HS6ST3Q8IZP7 471 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TOP6BLQ8N6T0 577 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TDRD5Q8NAT2 981 aaKnown RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 STKLD1Q8NE28 680 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 SPATA18Q8TC71 538 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 RSAD2Q8WXG1 361 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 FGF14Q92915 247 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 LRFN3Q9BTN0 628 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 APOBEC3GQ9HC16 384 aaKnown RBP9.33□□□□□ -0.92
SMG6-216ENST00000575176 HSFX1Q9UBD0 423 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 HMGXB4Q9UGU5 601 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 POLIQ9UNA4 740 aa9.33□□□□□ -0.92
SMG6-216ENST00000575176 NARSO43776 548 aaKnown RBP9.32□□□□□ -0.92
SMG6-216ENST00000575176 ATP2C2O75185 946 aa9.32□□□□□ -0.92
SMG6-216ENST00000575176 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
SMG6-216ENST00000575176 PDGFBP01127 241 aaPredicted RBP9.32□□□□□ -0.92
SMG6-216ENST00000575176 LAMP2P13473 410 aa9.32□□□□□ -0.92
SMG6-216ENST00000575176 CPB1P15086 417 aa9.32□□□□□ -0.92
SMG6-216ENST00000575176 HMGA1P17096 107 aaKnown RBP9.32□□□□□ -0.92
SMG6-216ENST00000575176 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
SMG6-216ENST00000575176 ACAT1P24752 427 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms