RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 TSSK1BQ9BXA7 367 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 MANSC1Q9H8J5 431 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 CHMP2AO43633 222 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
TRPV1-208ENST00000574085 DNAJC6O75061 913 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 BAG2O95816 211 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 KRT72Q14CN4 511 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 ST13P4Q8IZP2 240 aaPredicted RBP13.4□□□□□ -0.26
TRPV1-208ENST00000574085 ZNF276Q8N554 614 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 GLIS1Q8NBF1 620 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 OLFM3Q96PB7 478 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 CYTH2Q99418 400 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 NDE1Q9NXR1 346 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 ARMCX1Q9P291 453 aa13.4□□□□□ -0.26
TRPV1-208ENST00000574085 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
TRPV1-208ENST00000574085 USP1O94782 785 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 FAM200BP0CF97 657 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 FDX1P10109 184 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 GJC1P36383 396 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 CCNFP41002 786 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SLC1A1P43005 524 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 BPIFB4P59827 614 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.274e-6■■■■■ 28.8
TRPV1-208ENST00000574085 ACAD10Q6JQN1 1059 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 KLF6Q99612 283 aaPredicted RBP13.39□□□□□ -0.27
TRPV1-208ENST00000574085 TTC1Q99614 292 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
TRPV1-208ENST00000574085 KCNK13Q9HB14 408 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 ARHGEF4Q9NR80 690 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 IL1RAPL1Q9NZN1 696 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SLC17A7Q9P2U7 560 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SLC24A2Q9UI40 661 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 MTO1Q9Y2Z2 717 aaKnown RBP13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 FCHO1O14526 889 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 CDC16Q13042 620 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 C1orf220Q5T0J3 134 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 RIPOR1Q6ZS17 1223 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SLC9A9Q8IVB4 645 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 CCDC110Q8TBZ0 833 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 CORO1BQ9BR76 489 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 TMEM117Q9H0C3 514 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 RHBDL2Q9NX52 303 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 SEL1LQ9UBV2 794 aa13.39□□□□□ -0.27
TRPV1-208ENST00000574085 B2RBV5 119 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 F8W8V4 182 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 H3BRJ5 948 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 BANF1O75531 89 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 PIAS1O75925 651 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 TMCC1O94876 653 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 CALCAP01258 141 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 CRABP2P29373 138 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 MXI1P50539 228 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SNAP25P60880 206 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 PDIA2Q13087 525 aaKnown RBP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 CBX3Q13185 183 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 TMEM110Q86TL2 294 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ANKMY2Q8IV38 441 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SDR16C5Q8N3Y7 309 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 NAT14Q8WUY8 206 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SSU72Q9NP77 194 aaKnown RBP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ETNK2Q9NVF9 386 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 A6NJR5 290 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 P4HA2O15460 535 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 OPHN1O60890 802 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 CIB2O75838 187 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SLITRK3O94933 977 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ETS1P14921 441 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ADRA2BP18089 450 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ZNF76P36508 570 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 MFAP3P55082 362 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ARL4CP56559 192 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 USP46P62068 366 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 KBTBD12Q3ZCT8 623 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 FBXO27Q8NI29 283 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 PLEKHO2Q8TD55 490 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 SHC3Q92529 594 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
TRPV1-208ENST00000574085 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 PANX3Q96QZ0 392 aa13.38□□□□□ -0.27
TRPV1-208ENST00000574085 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms