RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SMYD3Q9H7B4 428 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMG6-209ENST00000571442 GDAP2Q9NXN4 497 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 STK39Q9UEW8 545 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 SSX2IPQ9Y2D8 614 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 DOCK8Q8NF50 2099 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 MTMR11A4FU01 709 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 GOLGA6L22H0YM25 854 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 SLC16A3O15427 465 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 CCL16O15467 120 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 NCK2O43639 380 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 PAPLNO95428 1278 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 STAU1O95793 577 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 MBD3O95983 291 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 ASS1P00966 412 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 C8AP07357 584 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 EPB41P11171 864 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 PNPLA4P41247 253 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 ASPAP45381 313 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 GPR15P49685 360 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 PSMC1P62191 440 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 NTHL1P78549 312 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 STIM1Q13586 685 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 BMS1Q14692 1282 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 SMAD2Q15796 467 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 HSP90AA4PQ58FG1 418 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 DCAF17Q5H9S7 520 aaPredicted RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 CCDC183Q5T5S1 534 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 CAVIN1Q6NZI2 390 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 FOXR2Q6PJQ5 311 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 SCARA5Q6ZMJ2 495 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 PPFIBP1Q86W92 1011 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 ADGRF2Q8IZF7 708 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 MLKLQ8NB16 471 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 ATAD1Q8NBU5 361 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 STKLD1Q8NE28 680 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 APPL2Q8NEU8 664 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 TATDN2Q93075 761 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 CEP63Q96MT8 703 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 FUCA2Q9BTY2 467 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 RHOBTB2Q9BYZ6 727 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 DPEP3Q9H4B8 488 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 POMKQ9H5K3 350 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 CRTAC1Q9NQ79 661 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 HCFC1R1Q9NWW0 138 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 DDX43Q9NXZ2 648 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 HMGXB4Q9UGU5 601 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 RAPGEFL1Q9UHV5 662 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 RWDD2AQ9UIY3 292 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 SLC27A5Q9Y2P5 690 aa7.5□□□□□ -1.21
SMG6-209ENST00000571442 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.5□□□□□ -1.21
SMG6-209ENST00000571442 CCDC195A0A1B0GUA6 201 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 MYBPHLA2RUH7 354 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 H7C4K7 107 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 IKBKBO14920 756 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 N4BP1O75113 896 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 PHACTR2O75167 634 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ZMYND10O75800 440 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 PDGFRBP09619 1106 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 KRT13P13646 458 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 CPB1P15086 417 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ATF2P15336 505 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 WARSP23381 471 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 SP100P23497 879 aaPredicted RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 PPP1R2P41236 205 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 PIK3CAP42336 1068 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 MXI1P50539 228 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 MARSP56192 900 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 APBA1Q02410 837 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 CREMQ03060 361 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ENPEPQ07075 957 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 DUSP4Q13115 394 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 GPR17Q13304 367 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ORC1Q13415 861 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 TRPC3Q13507 836 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 WDR72Q3MJ13 1102 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 CCDC40Q4G0X9 1142 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 SLC39A12Q504Y0 691 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 TCERG1LQ5VWI1 586 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 PDXDC1Q6P996 788 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 FRMD5Q7Z6J6 570 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 GPR149Q86SP6 731 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 USP37Q86T82 979 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 TRIM59Q8IWR1 403 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ST13P5Q8NFI4 369 aaPredicted RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 ZNF461Q8TAF7 563 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 LMO3Q8TAP4 145 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMG6-209ENST00000571442 TWNKQ96RR1 684 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 ARID3AQ99856 593 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 C1QTNF1Q9BXJ1 281 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 HSD3B7Q9H2F3 369 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms