RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CCND1P24385 295 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 SLC1A5Q15758 541 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 CCNG2Q16589 344 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 CASC4Q6P4E1 433 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 RSBN1LQ6PCB5 846 aaPredicted RBP16.15■□□□□ 0.18
USP43-202ENST00000570475 DARS2Q6PI48 645 aaKnown RBP16.15■□□□□ 0.18
USP43-202ENST00000570475 C1orf228Q6PIY5 440 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 CCDC60Q8IWA6 550 aaPredicted RBP16.15■□□□□ 0.18
USP43-202ENST00000570475 C4orf19Q8IY42 314 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 PPM1NQ8N819 430 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 MCPH1Q8NEM0 835 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 ZNF516Q92618 1163 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 WNK4Q96J92 1243 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 OSBPL1AQ9BXW6 950 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
USP43-202ENST00000570475 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
USP43-202ENST00000570475 GNPTABQ3T906 1256 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 ZNF606Q8WXB4 792 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 IP6K2Q9UHH9 426 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 NUB1Q9Y5A7 615 aa16.15■□□□□ 0.18
USP43-202ENST00000570475 RASSF2P50749 326 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 MYBPC2Q14324 1141 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ANKRD20A2Q5SQ80 823 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ANKRD20A1Q5TYW2 823 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 CAPRIN2Q6IMN6 1127 aaKnown RBP16.14■□□□□ 0.17
USP43-202ENST00000570475 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PDIK1LQ8N165 341 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
USP43-202ENST00000570475 TTC8Q8TAM2 541 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ACTL9Q8TC94 416 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 RBM41Q96IZ5 413 aaKnown RBP16.14■□□□□ 0.17
USP43-202ENST00000570475 GYG2O15488 501 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PHBP35232 272 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 WNT7BP56706 349 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PSMC1P62191 440 aaKnown RBP16.14■□□□□ 0.17
USP43-202ENST00000570475 EMC2Q15006 297 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 NLRP9Q7RTR0 991 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 LRRC71Q8N4P6 559 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 CYP26B1Q9NR63 512 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 DGAT1O75907 488 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 SFNP31947 248 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 MYL6P60660 151 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ACTR2P61160 394 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 OTUD4Q01804 1114 aaKnown RBP16.14■□□□□ 0.17
USP43-202ENST00000570475 BNIP1Q12981 228 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 MTFR1Q15390 333 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 NFIL3Q16649 462 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ANKS1BQ7Z6G8 1248 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ABRAQ8N0Z2 381 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP43-202ENST00000570475 TMEM35BQ8NCS4 154 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 HIPK4Q8NE63 616 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 CCHCR1Q8TD31 782 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 FAM111AQ96PZ2 611 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 PXMP2Q9NR77 195 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 ARMCX1Q9P291 453 aa16.14■□□□□ 0.17
USP43-202ENST00000570475 FDX1P10109 184 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 SCARA3Q6AZY7 606 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 LRRC6Q86X45 466 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 LMNTD2Q8IXW0 634 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 E2F8A0AVK6 867 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 NAIF1Q69YI7 327 aaPredicted RBP16.13■□□□□ 0.17
USP43-202ENST00000570475 SAMD7Q7Z3H4 446 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 FBXO36Q8NEA4 188 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 HEY2Q9UBP5 337 aa16.13■□□□□ 0.17
USP43-202ENST00000570475 DCTN3O75935 186 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 ESRRAP11474 423 aaPredicted RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 TNFSF9P41273 254 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 ARL4CP56559 192 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 CENPCQ03188 943 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 CYP1B1Q16678 543 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 PPP6R3Q5H9R7 873 aaPredicted RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 TCP10LQ8TDR4 215 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 EXTL3O43909 919 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 LPXNO60711 386 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 RNF8O76064 485 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 CDH8P55286 799 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 HADHQ16836 314 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 SPOCD1Q6ZMY3 1216 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 ENOSF1Q7L5Y1 443 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 CFAP61Q8NHU2 1237 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 DDX1Q92499 740 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 APOBEC3GQ9HC16 384 aaKnown RBP16.12■□□□□ 0.17
USP43-202ENST00000570475 UBIAD1Q9Y5Z9 338 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 UNC5CO95185 931 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 KRT3P12035 628 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 KDSRQ06136 332 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 TSNAXIP1Q2TAA8 658 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 WDR72Q3MJ13 1102 aa16.12■□□□□ 0.17
USP43-202ENST00000570475 SYDE1Q6ZW31 735 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms