RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CEP72Q9P209 647 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 DSEQ9UL01 958 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
TSC2-220ENST00000568238 TICRRQ7Z2Z1 1910 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 COL4A2P08572 1712 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 PROB1E7EW31 1015 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 DCNP07585 359 aaKnown RBP13.91□□□□□ -0.18
TSC2-220ENST00000568238 CCR2P41597 374 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 TAF6P49848 677 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 EPHA5P54756 1037 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 STARD6P59095 220 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 PRKCQQ04759 706 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 DUSP4Q13115 394 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 GPR17Q13304 367 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 PNOCQ13519 176 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 CRELD2Q6UXH1 353 aaPredicted RBP13.91□□□□□ -0.18
TSC2-220ENST00000568238 UNC13DQ70J99 1090 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 NT5DC4Q86YG4 428 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 EFCAB13Q8IY85 973 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 HS6ST3Q8IZP7 471 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 ELSPBP1Q96BH3 223 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 SAAL1Q96ER3 474 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 ZNF560Q96MR9 790 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 FAM213AQ9BRX8 229 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 FGFBP2Q9BYJ0 223 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 SPTBN4Q9H254 2564 aa13.91□□□□□ -0.18
TSC2-220ENST00000568238 FANCMQ8IYD8 2048 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 CACNA1IQ9P0X4 2223 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 DMXL1Q9Y485 3027 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 CYP11A1P05108 521 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 MYL4P12829 197 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 GARTP22102 1010 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 FCARP24071 287 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 EPHB3P54753 998 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 FAM78AQ5JUQ0 283 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 TANGO2Q6ICL3 276 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 POTEHQ6S545 545 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 METTL23Q86XA0 190 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 OR10T2Q8NGX3 314 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 ERCC4Q92889 916 aaPredicted RBP13.9□□□□□ -0.18
TSC2-220ENST00000568238 TIGD1Q96MW7 591 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 ASB16Q96NS5 453 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 EXOC1Q9NV70 894 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 RBAKQ9NYW8 714 aaPredicted RBP13.9□□□□□ -0.18
TSC2-220ENST00000568238 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
TSC2-220ENST00000568238 F5P12259 2224 aa13.9□□□□□ -0.18
TSC2-220ENST00000568238 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 KANSL1LA0AUZ9 987 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 NRG2O14511 850 aaPredicted RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 CYB561D2O14569 222 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 KLRC4O43908 158 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 MYL1P05976 194 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 DPYDQ12882 1025 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 SV2CQ496J9 727 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 SLC44A4Q53GD3 710 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 FAM26FQ5R3K3 315 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 CENPPQ6IPU0 288 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 ATAD1Q8NBU5 361 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 GLIS3Q8NEA6 775 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 SMARCD2Q92925 531 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 TMEM209Q96SK2 561 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 PLA2G2FQ9BZM2 168 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 DNAJC25Q9H1X3 360 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 SLITRK6Q9H5Y7 841 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 TMEM206Q9H813 350 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 ZFP14Q9HCL3 533 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 DLGAP2Q9P1A6 1054 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 HOOK1Q9UJC3 728 aaKnown RBP13.89□□□□□ -0.19
TSC2-220ENST00000568238 SLC27A5Q9Y2P5 690 aa13.89□□□□□ -0.19
TSC2-220ENST00000568238 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 PRR23AA6NEV1 266 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 EXTL3O43909 919 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 MOSPD3O75425 235 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
TSC2-220ENST00000568238 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
TSC2-220ENST00000568238 GJA1P17302 382 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 PNPLA4P41247 253 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 WNT7BP56706 349 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 GRM2Q14416 872 aa13.88□□□□□ -0.19
TSC2-220ENST00000568238 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms