RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ATAT1Q5SQI0 421 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 ZNF362Q5T0B9 420 aaPredicted RBP6.2□□□□□ -1.42
UBR1-205ENST00000564540 IFIT1BQ5T764 474 aaKnown RBP6.2□□□□□ -1.42
UBR1-205ENST00000564540 STRIP1Q5VSL9 837 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 ADGRG3Q86Y34 549 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 PSD4Q8NDX1 1056 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 TOR1AIP2Q8NFQ8 470 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 MYCBPAPQ8TBZ2 947 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 TFAP2BQ92481 460 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 PDLIM2Q96JY6 352 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 TLK1Q9UKI8 766 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 ARHGEF17Q96PE2 2063 aaPredicted RBP6.2□□□□□ -1.42
UBR1-205ENST00000564540 E7ENX8 843 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 PROM1O43490 865 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 OFD1O75665 1012 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 FOLR3P41439 243 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 RARRES1P49788 294 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 TAP2Q03519 686 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 HLXQ14774 488 aaPredicted RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 TAF2Q6P1X5 1199 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 USP37Q86T82 979 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 TPH2Q8IWU9 490 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 RAVER1Q8IY67 606 aaKnown RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 FAM9AQ8IZU1 332 aaPredicted RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 PCSK9Q8NBP7 692 aaKnown RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 PLBD2Q8NHP8 589 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 FBXL20Q96IG2 436 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 LRGUKQ96M69 825 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 CGRRF1Q99675 332 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 CNPPD1Q9BV87 410 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 ARMT1Q9H993 441 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 KIAA1586Q9HCI6 787 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 THRAP3Q9Y2W1 955 aaKnown RBP6.19□□□□□ -1.42
UBR1-205ENST00000564540 INSL6Q9Y581 213 aa6.19□□□□□ -1.42
UBR1-205ENST00000564540 SHROOM4Q9ULL8 1493 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 M0QYG6 137 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 CHEK2O96017 543 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 HDCP19113 662 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 TOB1P50616 345 aaPredicted RBP6.18□□□□□ -1.42
UBR1-205ENST00000564540 HNRNPA0Q13151 305 aaKnown RBP6.18□□□□□ -1.42
UBR1-205ENST00000564540 KIAA0895LQ68EN5 471 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 PRIMA1Q86XR5 153 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 CAGE1Q8TC20 777 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 FAM167AQ96KS9 214 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 ZIM2Q9NZV7 527 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 PCDHA6Q9UN73 950 aa6.18□□□□□ -1.42
UBR1-205ENST00000564540 COL11A2P13942 1736 aaPredicted RBP6.17□□□□□ -1.42
UBR1-205ENST00000564540 A0A0B4J269 797 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 VWC2LB2RUY7 222 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 ADM5C9JUS6 153 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 F5H697 171 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 GNAI2P04899 355 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 CHRM2P08172 466 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 NDUFV1P49821 464 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 MAPK10P53779 464 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 TUBB3Q13509 450 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 BOP1Q14137 746 aaKnown RBP6.17□□□□□ -1.42
UBR1-205ENST00000564540 KAZNQ674X7 775 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 FBXO42Q6P3S6 717 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 FAM98AQ8NCA5 519 aaKnown RBP6.17□□□□□ -1.42
UBR1-205ENST00000564540 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 DIS3LQ8TF46 1054 aaKnown RBP6.17□□□□□ -1.42
UBR1-205ENST00000564540 C1GALT1C1Q96EU7 318 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 CDK5RAP3Q96JB5 506 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 DUSP26Q9BV47 211 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 CDH19Q9H159 772 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 RSAD1Q9HA92 442 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 IL17RBQ9NRM6 502 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 PNMA8BQ9ULN7 279 aaPredicted RBP6.17□□□□□ -1.42
UBR1-205ENST00000564540 STXBP5LQ9Y2K9 1186 aa6.17□□□□□ -1.42
UBR1-205ENST00000564540 E2F8A0AVK6 867 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 MPPED1O15442 326 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 RHOP08100 348 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 EPHB1P54762 984 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 TCF15Q12870 199 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 RD3Q7Z3Z2 195 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 PEG10Q86TG7 708 aaKnown RBP6.16□□□□□ -1.42
UBR1-205ENST00000564540 CAMKK1Q8N5S9 505 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 BOLLQ8N9W6 283 aaKnown RBP6.16□□□□□ -1.42
UBR1-205ENST00000564540 FAM46DQ8NEK8 389 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 KLHDC4Q8TBB5 520 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 BRIX1Q8TDN6 353 aaKnown RBP6.16□□□□□ -1.42
UBR1-205ENST00000564540 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
UBR1-205ENST00000564540 ANLNQ9NQW6 1124 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 STAP2Q9UGK3 403 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 SPATA31A6Q5VVP1 1343 aa6.16□□□□□ -1.42
UBR1-205ENST00000564540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 DNAJB5O75953 348 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 ELFN1P0C7U0 828 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 MYBP10242 640 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 SOX8P57073 446 aa6.15□□□□□ -1.42
UBR1-205ENST00000564540 TXNRD1Q16881 649 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms