RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LRRC3Q9BY71 257 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 ZCWPW1Q9H0M4 648 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
SPG7-210ENST00000564409 NUP210Q8TEM1 1887 aaPredicted RBP16.2■□□□□ 0.18
SPG7-210ENST00000564409 SPTLC2O15270 562 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 YEATS4O95619 227 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 LMNAP02545 664 aaKnown RBP16.19■□□□□ 0.18
SPG7-210ENST00000564409 SP9P0CG40 484 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 WEE1P30291 646 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 VEPH1Q14D04 833 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 POTEHQ6S545 545 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 DNAJB7Q7Z6W7 309 aaPredicted RBP16.19■□□□□ 0.18
SPG7-210ENST00000564409 TMC8Q8IU68 726 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 EFCAB13Q8IY85 973 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 DCP1BQ8IZD4 617 aaKnown RBP16.19■□□□□ 0.18
SPG7-210ENST00000564409 LRRC52Q8N7C0 313 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 ATAD1Q8NBU5 361 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 MSANTD3Q96H12 275 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 ZSWIM3Q96MP5 696 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 FAM213AQ9BRX8 229 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 DNAJC25Q9H1X3 360 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 CRISPLD1Q9H336 500 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 TBC1D7Q9P0N9 293 aa16.19■□□□□ 0.18
SPG7-210ENST00000564409 DENND4CQ5VZ89 1909 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 TICRRQ7Z2Z1 1910 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 A0A087X0B3 334 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 ZNF263O14978 683 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 LAMTOR5O43504 91 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 EXTL3O43909 919 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 KCNA1Q09470 495 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 TEAD2Q15562 447 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 SLC39A12Q504Y0 691 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 ARHGAP15Q53QZ3 475 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 VITQ6UXI7 678 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 OR10T2Q8NGX3 314 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 ZNF334Q9HCZ1 680 aaPredicted RBP16.18■□□□□ 0.18
SPG7-210ENST00000564409 HEBP1Q9NRV9 189 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 SPATA6Q9NWH7 488 aaPredicted RBP16.18■□□□□ 0.18
SPG7-210ENST00000564409 OBP2AQ9NY56 170 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 RBAKQ9NYW8 714 aaPredicted RBP16.18■□□□□ 0.18
SPG7-210ENST00000564409 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 SLC27A5Q9Y2P5 690 aa16.18■□□□□ 0.18
SPG7-210ENST00000564409 MYO15AQ9UKN7 3530 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 SOBPA7XYQ1 873 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 CHADO15335 359 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 CUTAO60888 179 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 CDC25CP30307 473 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 GDI1P31150 447 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 CASP5P51878 434 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 TFAMQ00059 246 aaKnown RBP16.17■□□□□ 0.18
SPG7-210ENST00000564409 TSPY1Q01534 308 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 FCHO2Q0JRZ9 810 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 SURF1Q15526 300 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
SPG7-210ENST00000564409 WSCD1Q658N2 575 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 ATL3Q6DD88 541 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 YAF2Q8IY57 180 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 PDILTQ8N807 584 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 IQUBQ8NA54 791 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 KIAA1586Q9HCI6 787 aa16.17■□□□□ 0.18
SPG7-210ENST00000564409 MTF2Q9Y483 593 aaPredicted RBP16.17■□□□□ 0.18
SPG7-210ENST00000564409 COL4A2P08572 1712 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 HEPACAM2A8MVW5 462 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 EIF3DO15371 548 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPG7-210ENST00000564409 HUS1O60921 280 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 LRRN2O75325 713 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 TARSP26639 723 aaKnown RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 VIPR2P41587 438 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 SNRPFP62306 86 aaKnown RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 RBP5P82980 135 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 GRM2Q14416 872 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 E2F4Q16254 413 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 TAF12Q16514 161 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 MGAT5BQ3V5L5 792 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 GAREM2Q75VX8 874 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 ADSSL1Q8N142 457 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 GPD1LQ8N335 351 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 KCNG4Q8TDN1 519 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 LEO1Q8WVC0 666 aaPredicted RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 SAAL1Q96ER3 474 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 GCNAQ96QF7 691 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 TMEM209Q96SK2 561 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 SEPT5Q99719 369 aaPredicted RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 ACBD6Q9BR61 282 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 FAM126AQ9BYI3 521 aaPredicted RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 GDAP2Q9NXN4 497 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms