RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 LONRF1Q17RB8 773 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 CNPY1Q3B7I2 92 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SH2D4BQ5SQS7 431 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 UBAP2Q5T6F2 1119 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 ACBD5Q5T8D3 534 aaPredicted RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 C17orf99Q6UX52 265 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 LRRC74BQ6ZQY2 392 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 PLEKHH3Q7Z736 793 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 DPP9Q86TI2 863 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 GDAP1Q8TB36 358 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 ZNF398Q8TD17 642 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 U2AF1L4Q8WU68 220 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 DNAJC19Q96DA6 116 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 OLFM3Q96PB7 478 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 CENPKQ9BS16 269 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SPATA16Q9BXB7 569 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 NT5C3AQ9H0P0 336 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 CDC42EP4Q9H3Q1 356 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 WHRNQ9P202 907 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 TCEAL9Q9UHQ7 104 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 KIAA1024Q9UPX6 916 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 H0Y3Z8 333 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 CETN3O15182 167 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 DHX15O43143 795 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 ENTPD5O75356 428 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 EDNRBP24530 442 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 PON1P27169 355 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SP4Q02446 784 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 MPP2Q14168 576 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 TCEAL1Q15170 157 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 EXOC3L4Q17RC7 722 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 C11orf63Q6NUN7 778 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 POTEGQ6S5H5 508 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 MIER3Q7Z3K6 550 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 KCNK18Q7Z418 384 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 CATSPER3Q86XQ3 398 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 RIBC1Q8N443 379 aaPredicted RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 PPP1R14BQ96C90 147 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 C18orf8Q96DM3 657 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 CDHR1Q96JP9 859 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 KCTD10Q9H3F6 313 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 TBC1D30Q9Y2I9 924 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 MYH11P35749 1972 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 MAFGO15525 162 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 MAP3K7O43318 606 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 CA12O43570 354 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 GH1P01241 217 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 CREB1P16220 341 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 MUTP22033 750 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 NR1H3Q13133 447 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
TCF4-222ENST00000564228 GRB14Q14449 540 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 ZNF365Q70YC5 407 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 TPH2Q8IWU9 490 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 UBL4BQ8N7F7 174 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
TCF4-222ENST00000564228 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 SLCO2A1Q92959 643 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 ZNF184Q99676 751 aaPredicted RBP11.69□□□□□ -0.54
TCF4-222ENST00000564228 MMADHCQ9H3L0 296 aaPredicted RBP11.69□□□□□ -0.54
TCF4-222ENST00000564228 UBN1Q9NPG3 1134 aa11.69□□□□□ -0.54
TCF4-222ENST00000564228 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
TCF4-222ENST00000564228 GTPBP10A4D1E9 387 aaKnown RBP11.68□□□□□ -0.54
TCF4-222ENST00000564228 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 E9PMD0 336 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 SLC26A4O43511 780 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 ZWINTO95229 277 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 CCDC166P0CW27 439 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 ACTN1P12814 892 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 KCNA2P16389 499 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 RPA1P27694 616 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 FOXN2P32314 431 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 MCL1Q07820 350 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 CALCOCO2Q13137 446 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 RCN1Q15293 331 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 HYIQ5T013 277 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 CCDC137Q6PK04 289 aaKnown RBP11.68□□□□□ -0.54
TCF4-222ENST00000564228 FBXO16Q8IX29 292 aaPredicted RBP11.68□□□□□ -0.54
TCF4-222ENST00000564228 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
TCF4-222ENST00000564228 OLIG1Q8TAK6 271 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms