RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 FAM172AQ8WUF8 416 aa13□□□□□ -0.33
SCAMP2-204ENST00000563829 CCDC97Q96F63 343 aaPredicted RBP13□□□□□ -0.33
SCAMP2-204ENST00000563829 PRICKLE1Q96MT3 831 aaPredicted RBP13□□□□□ -0.33
SCAMP2-204ENST00000563829 ADAMTS6Q9UKP5 1117 aa13□□□□□ -0.33
SCAMP2-204ENST00000563829 BARX2Q9UMQ3 279 aaPredicted RBP13□□□□□ -0.33
SCAMP2-204ENST00000563829 LRP5O75197 1615 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 ETS1P14921 441 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 EPHB1P54762 984 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 KCNQ4P56696 695 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 GEMIN4P57678 1058 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 GRM2Q14416 872 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 PAOXQ6QHF9 649 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 ZFP28Q8NHY6 868 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 USP6NLQ92738 828 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 MARCOQ9UEW3 520 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 TFAP2AP05549 437 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 SERPINB6P35237 376 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 RPL5P46777 297 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 ALDH18A1P54886 795 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 DLG4P78352 724 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 ZYXQ15942 572 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 TBC1D9BQ66K14 1250 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 KLHL35Q6PF15 583 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 RNF111Q6ZNA4 994 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 ARL10Q8N8L6 244 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 FAM111AQ96PZ2 611 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 S100A14Q9HCY8 104 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 PFDN4Q9NQP4 134 aa12.99□□□□□ -0.33
SCAMP2-204ENST00000563829 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 MYOCOSA0A1B0GUC4 107 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 E5RJQ4 531 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 EMP3P54852 163 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 FOLH1Q04609 750 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 ZFYVE27Q5T4F4 411 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 RELL1Q8IUW5 271 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 SORBS2O94875 1100 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 FAM13AO94988 1023 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 BMP3P12645 472 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 IL2RBP14784 551 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 SSTR1P30872 391 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 GCLMP48507 274 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 SERPINB8P50452 374 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 PDE1BQ01064 536 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 ACAP1Q15027 740 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 PRR16Q569H4 304 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 TSHZ1Q6ZSZ6 1077 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 TAB3Q8N5C8 712 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 VPS11Q9H270 941 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 MYH11P35749 1972 aa12.98□□□□□ -0.33
SCAMP2-204ENST00000563829 LPXNO60711 386 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 FKBP6O75344 327 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 SMIM18P0DKX4 95 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 SLC16A2P36021 539 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 MLH1P40692 756 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 CDK8P49336 464 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 GPS1Q13098 491 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 TFDP1Q14186 410 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 ANKRD20A4Q4UJ75 823 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 KAZNQ674X7 775 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 ANKS1BQ7Z6G8 1248 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 CLEC10AQ8IUN9 316 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 SLC35B4Q969S0 331 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 APPL1Q9UKG1 709 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 HEMK1Q9Y5R4 338 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 NDC80O14777 642 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 MTA2O94776 668 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 CALCAP01258 141 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 CYP1A2P05177 515 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 DCCP43146 1447 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 SLC25A3Q00325 362 aa12.97□□□□□ -0.33
SCAMP2-204ENST00000563829 TBL3Q12788 808 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms