RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 IER2Q9BTL4 223 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 ZCWPW1Q9H0M4 648 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 ZHX3Q9H4I2 956 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 C2orf42Q9NWW7 574 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 ASB3Q9Y575 518 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 PRAMEF12O95522 483 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 ATF6P18850 670 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 SCP2P22307 547 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 GABRR2P28476 465 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 HOXC13P31276 330 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 SCN1AP35498 2009 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 CCR3P51677 355 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 ATXN1P54253 815 aaKnown RBP18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 CYP4F8P98187 520 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 GPR158Q5T848 1215 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 ARMCX5Q6P1M9 558 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 Q6ZS52 159 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 LRRTM3Q86VH5 581 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 YAF2Q8IY57 180 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 CSGALNACT1Q8TDX6 532 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 IL21Q9HBE4 155 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 GTSE1Q9NYZ3 720 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 DERAQ9Y315 318 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 STYXL1Q9Y6J8 313 aa18.19■□□□□ 0.5
HDGFL3-203ENST00000563404 MYBPHLA2RUH7 354 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 SPECC1L-ADORA2AF8WAN1 911 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 KRT18P05783 430 aaKnown RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 LONP1P36776 959 aaKnown RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 CXCL12P48061 93 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 KPNA1P52294 538 aaPredicted RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 NRLP54845 237 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 SF3A1Q15459 793 aaKnown RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 ADALQ6DHV7 355 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 CRELD2Q6UXH1 353 aaPredicted RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 USP49Q70CQ1 688 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 GPR161Q8N6U8 529 aaKnown RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 SEPT5Q99719 369 aaPredicted RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 C8orf33Q9H7E9 229 aaPredicted RBP18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 HSFX1Q9UBD0 423 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 SMC3Q9UQE7 1217 aa18.18■□□□□ 0.5
HDGFL3-203ENST00000563404 K7ESF4 209 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 CYB561D2O14569 222 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 TBCAO75347 108 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 PAX3P23760 479 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 ADSSP30520 456 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 CTHP32929 405 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 TNK2Q07912 1038 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 LARP1BQ659C4 914 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 EFCAB13Q8IY85 973 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 SPEM1Q8N4L4 309 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 LARP4BQ92615 738 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 SECISBP2LQ93073 1101 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 MSANTD3Q96H12 275 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 SMG9Q9H0W8 520 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 ST6GALNAC4Q9H4F1 302 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 ASB7Q9H672 318 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 AGO2Q9UKV8 859 aaKnown RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 USP18Q9UMW8 372 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 C2CD2Q9Y426 696 aa18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 NUP210Q8TEM1 1887 aaPredicted RBP18.17■□□□□ 0.5
HDGFL3-203ENST00000563404 CHURC1-FNTBB4DL54 471 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 HRO43593 1189 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 FGF19O95750 216 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 WEE1P30291 646 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 DDIT3P35638 169 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 FNTBP49356 437 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 TUFMP49411 452 aaKnown RBP18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 WNT7BP56706 349 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 SPEM2Q0P670 501 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 SRSF5Q13243 272 aaKnown RBP18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 PPP2R5DQ14738 602 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 MGAT5BQ3V5L5 792 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 ARHGAP29Q52LW3 1261 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 SCARA3Q6AZY7 606 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 ZNF720Q7Z2F6 126 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 ITIH5Q86UX2 942 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 CELF5Q8N6W0 485 aaKnown RBP18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 GIPC2Q8TF65 315 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 EPSTI1Q96J88 318 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 PYM1Q9BRP8 204 aaKnown RBP18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 STRA6Q9BX79 667 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 CCSER1Q9C0I3 900 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 TASP1Q9H6P5 420 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 DPP3Q9NY33 737 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 OBP2AQ9NY56 170 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 GMEB2Q9UKD1 530 aa18.16■□□□□ 0.5
HDGFL3-203ENST00000563404 DPYSL4O14531 572 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 PPP1R37O75864 691 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 PAPSS2O95340 614 aaPredicted RBP18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 TAF6P49848 677 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 LMNB2Q03252 620 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 KCNA1Q09470 495 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 CCINQ13939 588 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 LRRC32Q14392 662 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 PON2Q15165 354 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 ARHGAP15Q53QZ3 475 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 LAIR1Q6GTX8 287 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms