RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 NT5DC1Q5TFE4 455 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 TRIM68Q6AZZ1 485 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ZNF280DQ6N043 979 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 Q6ZUG5 572 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 DNAJB7Q7Z6W7 309 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 C11orf74Q86VG3 221 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ZBTB8OSQ8IWT0 167 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 TPH2Q8IWU9 490 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 FBXL16Q8N461 479 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 TTC9BQ8N6N2 239 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 OLIG1Q8TAK6 271 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 HNRNPLLQ8WVV9 542 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 PIGKQ92643 395 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 BRF1Q92994 677 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 PSMG2Q969U7 264 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ADPGKQ9BRR6 497 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 SMG9Q9H0W8 520 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ATXN3LQ9H3M9 355 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 MBD1Q9UIS9 605 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 NAP1L2Q9ULW6 460 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ASXL3Q9C0F0 2248 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 MYOFQ9NZM1 2061 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 SCN1AP35498 2009 aa8.46□□□□□ -1.05
HERPUD1-206ENST00000563343 DPYSL4O14531 572 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 OR4Q2P0C623 313 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CPB1P15086 417 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 ARSAP15289 507 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 KCNE1P15382 129 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 GCFC2P16383 781 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.063e-8■■□□□ 11.9
HERPUD1-206ENST00000563343 GABRR2P28476 465 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 GRM5P41594 1212 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 MAPK8P45983 427 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CYP4F8P98187 520 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 DUSP4Q13115 394 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 PTPAQ15257 358 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 MAPK6Q16659 721 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF423Q2M1K9 1284 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 FBXO43Q4G163 708 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CENPPQ6IPU0 288 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC23A3Q6PIS1 610 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CCNI2Q6ZMN8 369 aaPredicted RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 MAEAQ7L5Y9 396 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 KRT25Q7Z3Z0 450 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 NEK8Q86SG6 692 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 MDM1Q8TC05 714 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 PIGOQ8TEQ8 1089 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CRELD1Q96HD1 420 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 LRIG1Q96JA1 1093 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 TBC1D32Q96NH3 1257 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 PGLYRP2Q96PD5 576 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC46A2Q9BY10 475 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 EBF3Q9H4W6 596 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 TASP1Q9H6P5 420 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 NCOA5Q9HCD5 579 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 CCL26Q9Y258 94 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 ZNF462Q96JM2 2506 aa8.46□□□□□ -1.06
HERPUD1-206ENST00000563343 MTMR11A4FU01 709 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 M0QZQ0 153 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 TNFRSF10BO14763 440 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 OAZ2O95190 189 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 XRCC6P12956 609 aaKnown RBP eCLIP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 CD59P13987 128 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 HNRNPLP14866 589 aaKnown RBP eCLIP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 GJA4P35212 333 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 P2RY2P41231 377 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 DHPSP49366 369 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 EPHB3P54753 998 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 EVCP57679 992 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 GPR17Q13304 367 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 PLD1Q13393 1074 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 USP39Q53GS9 565 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 GALNT17Q6IS24 598 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 TMEM150AQ86TG1 271 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 FAM177A1Q8N128 213 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 MDGA1Q8NFP4 955 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 C18orf25Q96B23 403 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 CNOT6LQ96LI5 555 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 AIFM3Q96NN9 605 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 FNBP1Q96RU3 617 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 P2RY13Q9BPV8 354 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 NUSAP1Q9BXS6 441 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 C2orf40Q9H1Z8 148 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 CDT1Q9H211 546 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 PTPRHQ9HD43 1115 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 FSCN3Q9NQT6 498 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
HERPUD1-206ENST00000563343 DKK4Q9UBT3 224 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms