RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 PODXLO00592 558 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 NRP1O14786 923 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 P4HA2O15460 535 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 ITGB1P05556 798 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 GALTP07902 379 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 RPL9P32969 192 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 PBX2P40425 430 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 PEX19P40855 299 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 OR1G1P47890 313 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 SLC11A1P49279 550 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 BCAR1P56945 870 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 MYL6P60660 151 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 KCNMA1Q12791 1236 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 CRYMQ14894 314 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 TSNAXIP1Q2TAA8 658 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 ARMC3Q5W041 872 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 CD300LGQ6UXG3 332 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 FIBCD1Q8N539 461 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 MICAL1Q8TDZ2 1067 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 XPO4Q9C0E2 1151 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 UTP6Q9NYH9 597 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 SPTLC1O15269 473 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 N4BP1O75113 896 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 B3GAT3O94766 335 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 ALDH2P05091 517 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 SLC9A1P19634 815 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 USP8P40818 1118 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 PIK3CAP42336 1068 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 RBP5P82980 135 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 UBXN1Q04323 297 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 SPRED2Q7Z698 418 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 HASPINQ8TF76 798 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 UROC1Q96N76 676 aa12.47□□□□□ -0.41
HERC1-214ENST00000561400 BAG1Q99933 345 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 PRG3Q9Y2Y8 225 aaPredicted RBP12.47□□□□□ -0.41
HERC1-214ENST00000561400 ZSCAN9O15535 394 aaPredicted RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 KIF4AO95239 1232 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 ASS1P00966 412 aaKnown RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 CA3P07451 260 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 LILRA4P59901 499 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 APBA1Q02410 837 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 TRPC3Q13507 836 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 SPOPLQ6IQ16 392 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 SARM1Q6SZW1 724 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 KCNT2Q6UVM3 1135 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
HERC1-214ENST00000561400 HPDLQ96IR7 371 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 TMEM175Q9BSA9 504 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 PBX4Q9BYU1 374 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 GCNT4Q9P109 453 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 FAN1Q9Y2M0 1017 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 PCDHA11Q9Y5I1 949 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 PLXNA4Q9HCM2 1894 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 VWA8A3KMH1 1905 aa12.46□□□□□ -0.41
HERC1-214ENST00000561400 LINC01553A4QN01 128 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 IVLP07476 585 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 PON1P27169 355 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.42
HERC1-214ENST00000561400 KLK7P49862 253 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 MNAT1P51948 309 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 CORO7P57737 925 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 DCLRE1AQ6PJP8 1040 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 GBP6Q6ZN66 633 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 EHBP1Q8NDI1 1231 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.42
HERC1-214ENST00000561400 ERGIC2Q96RQ1 377 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 MARCH5Q9NX47 278 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.42
HERC1-214ENST00000561400 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
HERC1-214ENST00000561400 CETN1Q12798 172 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 TRIM65Q6PJ69 517 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 COLGALT1Q8NBJ5 622 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
HERC1-214ENST00000561400 INTS2Q9H0H0 1204 aaKnown RBP12.45□□□□□ -0.42
HERC1-214ENST00000561400 APOBEC3GQ9HC16 384 aaKnown RBP12.45□□□□□ -0.42
HERC1-214ENST00000561400 SIK3Q9Y2K2 1263 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 I3L4J1 428 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 LAG3P18627 525 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 ATICP31939 592 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 BRCC3P46736 316 aa12.45□□□□□ -0.42
HERC1-214ENST00000561400 TAF6P49848 677 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms