RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZNF233A6NK53 670 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
TPM1-223ENST00000560445 PRPF40AO75400 957 aaKnown RBP15.18■□□□□ 0.02
TPM1-223ENST00000560445 F13A1P00488 732 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 TNNC2P02585 160 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 GLULP15104 373 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 PSMC3P17980 439 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 CDC25CP30307 473 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 ADSSP30520 456 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 RBP5P82980 135 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
TPM1-223ENST00000560445 PSMG2Q969U7 264 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 DHX58Q96C10 678 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 ASB16Q96NS5 453 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 DDX23Q9BUQ8 820 aaKnown RBP15.18■□□□□ 0.02
TPM1-223ENST00000560445 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 ZCWPW1Q9H0M4 648 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 CEP72Q9P209 647 aa15.18■□□□□ 0.02
TPM1-223ENST00000560445 TISP43B9A030 160 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 DPYSL4O14531 572 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 PI15O43692 258 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 PCSK1P29120 753 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 SNW1Q13573 536 aaKnown RBP15.17■□□□□ 0.02
TPM1-223ENST00000560445 PPP2R5DQ14738 602 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 UBXN2BQ14CS0 331 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 MGAT5BQ3V5L5 792 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 SLC39A12Q504Y0 691 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 FAM78AQ5JUQ0 283 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 FAM26FQ5R3K3 315 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 CRELD2Q6UXH1 353 aaPredicted RBP15.17■□□□□ 0.02
TPM1-223ENST00000560445 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 GOLGA5Q8TBA6 731 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 ZSCAN18Q8TBC5 510 aaPredicted RBP15.17■□□□□ 0.02
TPM1-223ENST00000560445 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
TPM1-223ENST00000560445 ABCB6Q9NP58 842 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 FAM86C1Q9NVL1 165 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 OBP2AQ9NY56 170 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 ATP6V1DQ9Y5K8 247 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 TSC2P49815 1807 aa15.17■□□□□ 0.02
TPM1-223ENST00000560445 SOBPA7XYQ1 873 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 PPEF2O14830 753 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 ZNF263O14978 683 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 SPTLC1O15269 473 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 OR4Q2P0C623 313 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 POLR2BP30876 1174 aaKnown RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 LHX1P48742 406 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 MLLT6P55198 1093 aaPredicted RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 E2F4Q16254 413 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 DUOXA2Q1HG44 320 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 TPRG1Q6ZUI0 275 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 DPH6Q7L8W6 267 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 C1orf210Q8IVY1 113 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 EFCAB13Q8IY85 973 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 CSGALNACT1Q8TDX6 532 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 LEO1Q8WVC0 666 aaPredicted RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 RPP25Q9BUL9 199 aaKnown RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 LTB4R2Q9NPC1 389 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
TPM1-223ENST00000560445 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 AGAP1Q9UPQ3 857 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
TPM1-223ENST00000560445 A0A087X0B3 334 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 PVALEFA0A1B0GWK0 134 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 LAMTOR5O43504 91 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TPM1-223ENST00000560445 ITGB3P05106 788 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 MYL1P05976 194 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 KRT19P08727 400 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 DDX6P26196 483 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-223ENST00000560445 WEE1P30291 646 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 RPS9P46781 194 aaKnown RBP15.15■□□□□ 0.02
TPM1-223ENST00000560445 CASP5P51878 434 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 KCNA1Q09470 495 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 BFSP1Q12934 665 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 TEAD2Q15562 447 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 MAPRE1Q15691 268 aaKnown RBP15.15■□□□□ 0.02
TPM1-223ENST00000560445 WSCD1Q658N2 575 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 TANGO2Q6ICL3 276 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 UNC13DQ70J99 1090 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 DNAJB7Q7Z6W7 309 aaPredicted RBP15.15■□□□□ 0.02
TPM1-223ENST00000560445 WDR49Q8IV35 697 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 MFSD6LQ8IWD5 586 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 CSGALNACT2Q8N6G5 542 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 TOP6BLQ8N6T0 577 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 OR10T2Q8NGX3 314 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 TCEAL4Q96EI5 215 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 CCDC34Q96HJ3 373 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 FNBP1Q96RU3 617 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 ACBD6Q9BR61 282 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 CBWD1Q9BRT8 395 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 THG1LQ9NWX6 298 aaKnown RBP15.15■□□□□ 0.02
TPM1-223ENST00000560445 GDAP2Q9NXN4 497 aa15.15■□□□□ 0.02
TPM1-223ENST00000560445 UXTQ9UBK9 157 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms