RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 BZW2Q9Y6E2 419 aaKnown RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
CLPX-203ENST00000558958 ARHGEF37A1IGU5 675 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 CARNS1A5YM72 827 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 GABRDO14764 452 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 TLL1O43897 1013 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 CYP11A1P05108 521 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 PLEKP08567 350 aaPredicted RBP19.29■□□□□ 0.68
CLPX-203ENST00000558958 GNL1P36915 607 aaPredicted RBP19.29■□□□□ 0.68
CLPX-203ENST00000558958 NDST1P52848 882 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 RAD23BP54727 409 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 BPIFB4P59827 614 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 ZNF394Q53GI3 561 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 SLC47A2Q86VL8 602 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 UNC93AQ86WB7 457 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 TMEM173Q86WV6 379 aaPredicted RBP19.29■□□□□ 0.68
CLPX-203ENST00000558958 TMTC1Q8IUR5 882 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 FIBCD1Q8N539 461 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 OR6B3Q8NGW1 331 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 BCL7CQ8WUZ0 217 aaPredicted RBP19.29■□□□□ 0.68
CLPX-203ENST00000558958 ZNF558Q96NG5 402 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 TWNKQ96RR1 684 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 ELOVL4Q9GZR5 314 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 HAUS4Q9H6D7 363 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 ACP6Q9NPH0 428 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 DSEQ9UL01 958 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 PCDHB8Q9UN66 801 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 NME7Q9Y5B8 376 aa19.29■□□□□ 0.68
CLPX-203ENST00000558958 CYP11B1P15538 503 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 TYMPP19971 482 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 PTK2Q05397 1052 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 TDRD12Q587J7 1177 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 OSTM1Q86WC4 334 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 COLGALT1Q8NBJ5 622 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 SPATA18Q8TC71 538 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 EPS8L1Q8TE68 723 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 TMEM176AQ96HP8 235 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 GPR62Q9BZJ7 368 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 SNX25Q9H3E2 840 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 TIMM13Q9Y5L4 95 aaPredicted RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 SF3B1O75533 1304 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLPX-203ENST00000558958 SSU72P8A0A1W2PR75 194 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 NRDCO43847 1150 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 EFEMP2O95967 443 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 PAEPP09466 180 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 LINC00271P0C7V0 271 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 LHX1P48742 406 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 ELAVL2Q12926 359 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 FUT10Q6P4F1 479 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 NOP9Q86U38 636 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 SLC39A11Q8N1S5 342 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 SLC4A11Q8NBS3 891 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 CLP1Q92989 425 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 SYT11Q9BT88 431 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
CLPX-203ENST00000558958 NHEJ1Q9H9Q4 299 aaPredicted RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 NOCTQ9UK39 431 aaKnown RBP19.28■□□□□ 0.68
CLPX-203ENST00000558958 LCHNA4D1U4 455 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 SOWAHDA6NJG2 315 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 A8MXQ7 604 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 SYN3O14994 580 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 TNRC18O15417 2968 aaPredicted RBP19.27■□□□□ 0.67
CLPX-203ENST00000558958 CALCAP01258 141 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 LMO2P25791 158 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 EIF4A3P38919 411 aaKnown RBP19.27■□□□□ 0.67
CLPX-203ENST00000558958 PDE6CP51160 858 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 ORC1Q13415 861 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 METTL23Q86XA0 190 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 DDX1Q92499 740 aaKnown RBP19.27■□□□□ 0.67
CLPX-203ENST00000558958 AAASQ9NRG9 546 aa19.27■□□□□ 0.67
CLPX-203ENST00000558958 HCRTO43612 131 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 PDGFRBP09619 1106 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 TKTP29401 623 aaKnown RBP19.26■□□□□ 0.67
CLPX-203ENST00000558958 GNA15P30679 374 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 RABGGTBP53611 331 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 ASTE1Q2TB18 679 aaPredicted RBP19.26■□□□□ 0.67
CLPX-203ENST00000558958 FAM171A1Q5VUB5 890 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 FAM109BQ6ICB4 259 aaPredicted RBP19.26■□□□□ 0.67
CLPX-203ENST00000558958 CRYBG2Q8N1P7 616 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 OLIG1Q8TAK6 271 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 SLC20A1Q8WUM9 679 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 TRIM44Q96DX7 344 aaPredicted RBP19.26■□□□□ 0.67
CLPX-203ENST00000558958 CCDC42Q96M95 316 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 SPG21Q9NZD8 308 aa19.26■□□□□ 0.67
CLPX-203ENST00000558958 GRXCR1A8MXD5 290 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 ARHGAP6O43182 974 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 FGFR3P22607 806 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 ANXA13P27216 316 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 PPM1AP35813 382 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 OVOS1Q6IE37 1185 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 RAD9BQ6WBX8 426 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.25■□□□□ 0.67
CLPX-203ENST00000558958 ACOT1Q86TX2 421 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 ZNF677Q86XU0 584 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms