RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SPATA20Q8TB22 786 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 SLC7A14Q8TBB6 771 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 C2orf15Q8WU43 125 aaKnown RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 CCDC127Q96BQ5 260 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 BORCS6Q96GS4 357 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 CYP4F11Q9HBI6 524 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 TIMM13Q9Y5L4 95 aaPredicted RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 CACNA1HO95180 2353 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 WDR27A2RRH5 827 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ZNF197O14709 1029 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PPEF2O14830 753 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 SPTLC1O15269 473 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PHACTR2O75167 634 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 NR2F2P24468 414 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PSMC2P35998 433 aaKnown RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 TUFMP49411 452 aaKnown RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 CLDN10P78369 228 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 MYL7Q01449 175 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ADCY1Q08828 1119 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PLD1Q13393 1074 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ADAM9Q13443 819 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 IQCEQ6IPM2 695 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 CLEC17AQ6ZS10 378 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 INTS8Q75QN2 995 aaKnown RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 TOP6BLQ8N6T0 577 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 LEMD2Q8NC56 503 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 CXorf38Q8TB03 319 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PARD3BQ8TEW8 1205 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ZNF707Q96C28 371 aaPredicted RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 HPDLQ96IR7 371 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ZNF512Q96ME7 567 aaPredicted RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 CGRRF1Q99675 332 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 TSG101Q99816 390 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 ACBD6Q9BR61 282 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 MTMR12Q9C0I1 747 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 AVENQ9NQS1 362 aaPredicted RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 IGSF9Q9P2J2 1179 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 POLIQ9UNA4 740 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 SNX9Q9Y5X1 595 aa9.12□□□□□ -0.95
TPM1-213ENST00000558400 PTPRZ1P23471 2315 aaPredicted RBP9.12□□□□□ -0.95
TPM1-213ENST00000558400 CLUHO75153 1309 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 FAM186AA6NE01 2351 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 CETN3O15182 167 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 MICAL2O94851 1124 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 KRT13P13646 458 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 FSHRP23945 695 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 PCSK1P29120 753 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 PRCPP42785 496 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 ALDH1A3P47895 512 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 EPHB3P54753 998 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 PTPN5P54829 565 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 WNT7BP56706 349 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 TSPY1Q01534 308 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 BFSP1Q12934 665 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 WSCD1Q658N2 575 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 CENPPQ6IPU0 288 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 HFE2Q6ZVN8 426 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 UBALD2Q8IYN6 164 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 PRSS33Q8NF86 280 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 OR5B17Q8NGF7 314 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 SYAP1Q96A49 352 aaPredicted RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 DHTKD1Q96HY7 919 aaPredicted RBP9.11□□□□□ -0.95
TPM1-213ENST00000558400 MKNK1Q9BUB5 465 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 ZCWPW1Q9H0M4 648 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 SIX4Q9UIU6 781 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 ASB3Q9Y575 518 aa9.11□□□□□ -0.95
TPM1-213ENST00000558400 ATG2AQ2TAZ0 1938 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 C2CD4DB7Z1M9 353 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GABRDO14764 452 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 PSMA7O14818 248 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 CCL16O15467 120 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 STX10O60499 249 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GFRA3O60609 400 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GADD45BO75293 160 aaPredicted RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 CST3P01034 146 aaPredicted RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 C4BPAP04003 597 aaKnown RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 LAMP2P13473 410 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 P4HA1P13674 534 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GTF2H1P32780 548 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 VAMP7P51809 220 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 LRRC63Q05C16 580 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 DUSP4Q13115 394 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 MAPRE1Q15691 268 aaKnown RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 SGSM1Q2NKQ1 1148 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms