RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 SPTLC3Q9NUV7 552 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 RGL1Q9NZL6 768 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 A0A087WZ62 844 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 ZNF263O14978 683 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 POLBP06746 335 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 TMEM253P0C7T8 217 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 GFAPP14136 432 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 NNTQ13423 1086 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 ZSCAN26Q16670 478 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 ATP8B4Q8TF62 1192 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 ASB7Q9H672 318 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 SARS2Q9NP81 518 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 VPS51Q9UID3 782 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
NEK9-210ENST00000557026 SLIT1O75093 1534 aa12.52□□□□□ -0.41
NEK9-210ENST00000557026 H0Y626 953 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 SPAG7O75391 227 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 ACADMP11310 421 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 PMS2P54278 862 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 IGDCC4Q8TDY8 1250 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 EXT2Q93063 718 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 IL10P22301 178 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 NUDCD3Q8IVD9 361 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 SPATC1LQ9H0A9 340 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 TLR8Q9NR97 1041 aaKnown RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 FAF1Q9UNN5 650 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 CEP152O94986 1710 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 STX7O15400 261 aaKnown RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 KCNA4P22459 653 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 INPP5AQ14642 412 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 CTXN3Q4LDR2 81 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 SZRD1Q7Z422 152 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 PASD1Q8IV76 773 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 ADSSL1Q8N142 457 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 PPM1NQ8N819 430 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 UHMK1Q8TAS1 419 aaKnown RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 DTX3LQ8TDB6 740 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 BSNDQ8WZ55 320 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 IDI2Q9BXS1 227 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
NEK9-210ENST00000557026 PTPN3P26045 913 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 EPC1Q9H2F5 836 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 LNPEPQ9UIQ6 1025 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 PCDHB5Q9Y5E4 795 aa12.51□□□□□ -0.41
NEK9-210ENST00000557026 FKTNO75072 461 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CSPG5O95196 566 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 RRM1P23921 792 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 PDCLQ13371 301 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEK9-210ENST00000557026 PCYOX1LQ8NBM8 494 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 PTPRN2Q92932 1015 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 GANQ9H2C0 597 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CRLS1Q9UJA2 301 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CAPN7Q9Y6W3 813 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
NEK9-210ENST00000557026 ITGALP20701 1170 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 POU5F1BQ06416 359 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ANKS6Q68DC2 871 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 LRRC8BQ6P9F7 803 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 ACRBPQ8NEB7 543 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CSGALNACT1Q8TDX6 532 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 RBBP8Q99708 897 aa12.5□□□□□ -0.41
NEK9-210ENST00000557026 FBXO2Q9UK22 296 aaPredicted RBP12.5□□□□□ -0.41
NEK9-210ENST00000557026 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms