RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 TIPINQ9BVW5 301 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ANO3Q9BYT9 981 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 AGPAT3Q9NRZ7 376 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 NMRK1Q9NWW6 199 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ZNF148Q9UQR1 794 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 NFASCO94856 1347 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 F5H6K3 240 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 GSTA2P09210 222 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 IL1R1P14778 569 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 KLRC2P26717 231 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 PSMD7P51665 324 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 ITGA8P53708 1063 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 MTTPP55157 894 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 IL9RQ01113 521 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 NR1H3Q13133 447 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 GPATCH4Q5T3I0 446 aaKnown RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 FAM91A1Q658Y4 838 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
MARK3-210ENST00000556463 EPS8L1Q8TE68 723 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 FBXO9Q9UK97 447 aaPredicted RBP9.03□□□□□ -0.96
MARK3-210ENST00000556463 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 LRCH1Q9Y2L9 728 aa9.03□□□□□ -0.96
MARK3-210ENST00000556463 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 CYP3A4P08684 503 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 MAN1A1P33908 653 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 CALCOCO2Q13137 446 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 COG2Q14746 738 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.96
MARK3-210ENST00000556463 PLEKHG4Q58EX7 1191 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 TMEM53Q6P2H8 277 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 ANKRD35Q8N283 1001 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.96
MARK3-210ENST00000556463 CASP10Q92851 521 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 DCLK3Q9C098 648 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 LARSQ9P2J5 1176 aaKnown RBP9.02□□□□□ -0.96
MARK3-210ENST00000556463 UVRAGQ9P2Y5 699 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 SEL1LQ9UBV2 794 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 JAG2Q9Y219 1238 aa9.02□□□□□ -0.96
MARK3-210ENST00000556463 USP17L10C9JJH3 530 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 FAM86B1E9PN63 330 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 IPO5O00410 1097 aaKnown RBP9.02□□□□□ -0.97
MARK3-210ENST00000556463 FAM86B2P0C5J1 330 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 SPATA31D3P0C874 917 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 AKR1B1P15121 316 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 SREBF1P36956 1147 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 INHBCP55103 352 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 FMO1Q01740 532 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 BFSP1Q12934 665 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 TNIP1Q15025 636 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
MARK3-210ENST00000556463 SPATA31D4Q6ZUB0 917 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 ARHGEF19Q8IW93 802 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 C12orf56Q8IXR9 622 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 ERMNQ8TAM6 284 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 HSPBAP1Q96EW2 488 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 CHST7Q9NS84 486 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 BTG4Q9NY30 223 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 GTF3C4Q9UKN8 822 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 PTPN22Q9Y2R2 807 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 ZBED4O75132 1171 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 DDHD2O94830 711 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 GCNT3O95395 438 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 CBX6O95503 412 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 TROVE2P10155 538 aaKnown RBP eCLIP9.02□□□□□ -0.97
MARK3-210ENST00000556463 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 ZNF554Q86TJ5 538 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 CADM1Q9BY67 442 aaKnown RBP9.02□□□□□ -0.97
MARK3-210ENST00000556463 PRELID1Q9Y255 219 aa9.02□□□□□ -0.97
MARK3-210ENST00000556463 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 MEIS1O00470 390 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 MARK3P27448 753 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 VHLP40337 213 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 SYDE2Q5VT97 1194 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 ATP6V0A1Q93050 837 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 CCDC28BQ9BUN5 200 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 FAM192AQ9GZU8 254 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 BHMT2Q9H2M3 363 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 ANLNQ9NQW6 1124 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 KLHL42Q9P2K6 505 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 DCTN4Q9UJW0 460 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 MYH11P35749 1972 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 MSH4O15457 936 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
MARK3-210ENST00000556463 BCRP11274 1271 aa9.01□□□□□ -0.97
MARK3-210ENST00000556463 NMT1P30419 496 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms