RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 SSX2IPQ9Y2D8 614 aa15.03■□□□□ -0
VIPAS39-208ENST00000556412 HCRTO43612 131 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 CYP11A1P05108 521 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 TPM3P06753 285 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 PDGFRBP09619 1106 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 PHLDB3Q6NSJ2 640 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 PDXDC1Q6P996 788 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 DPH6Q7L8W6 267 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 OSTM1Q86WC4 334 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 MRPL43Q8N983 215 aaKnown RBP15.02■□□□□ -0
VIPAS39-208ENST00000556412 KAT5Q92993 513 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 EMILIN2Q9BXX0 1053 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 XPO4Q9C0E2 1151 aaKnown RBP15.02■□□□□ -0
VIPAS39-208ENST00000556412 APEX2Q9UBZ4 518 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 CDY1Q9Y6F8 540 aa15.02■□□□□ -0
VIPAS39-208ENST00000556412 TDRD15B5MCY1 1934 aaKnown RBP15.02■□□□□ -0
VIPAS39-208ENST00000556412 GBF1Q92538 1859 aa15.02□□□□□ -0.01
VIPAS39-208ENST00000556412 C2orf71A6NGG8 1288 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 A8MXQ7 604 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 FSCN2O14926 492 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 OAZ2O95190 189 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 OR4Q2P0C623 313 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 TBXAS1P24557 533 aaPredicted RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 GNL1P36915 607 aaPredicted RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 LHX1P48742 406 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ORC1Q13415 861 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ZNF394Q53GI3 561 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 PDE12Q6L8Q7 609 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 BCO2Q9BYV7 579 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 MTRRQ9UBK8 725 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 FBXL5Q9UKA1 691 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ANK1P16157 1881 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 PER2O15055 1255 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 TEX28O15482 410 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CBFA2T2O43439 604 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 TACC1O75410 805 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CNPP09543 421 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CPB1P15086 417 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 WARSP23381 471 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 LMO2P25791 158 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 KLRC2P26717 231 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 PSMC1P62191 440 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CREMQ03060 361 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 RAPGEF1Q13905 1077 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ADGRE1Q14246 886 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 NR1I3Q14994 352 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ARHGAP44Q17R89 818 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 RSPO2Q6UXX9 243 aaPredicted RBP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ADGRD2Q7Z7M1 963 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 OR10T2Q8NGX3 314 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 MYLIPQ8WY64 445 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 TMEM209Q96SK2 561 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 TRIM5Q9C035 493 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 SIX2Q9NPC8 291 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 CISHQ9NSE2 258 aa15.01□□□□□ -0.01
VIPAS39-208ENST00000556412 ADAM12O43184 909 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 OR1D2P34982 312 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 NDST1P52848 882 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 MFAP3P55082 362 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 GCNT1Q02742 428 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 MRPL58Q14197 206 aaKnown RBP15□□□□□ -0.01
VIPAS39-208ENST00000556412 KLHDC7AQ5VTJ3 777 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 LIMS2Q7Z4I7 341 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 PALB2Q86YC2 1186 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 NEK11Q8NG66 645 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 KLHL5Q96PQ7 755 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 ERGIC2Q96RQ1 377 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
VIPAS39-208ENST00000556412 RTP3Q9BQQ7 232 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 CLSTN3Q9BQT9 956 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 TLE6Q9H808 572 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 HMGXB4Q9UGU5 601 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 DNAJC12Q9UKB3 198 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 SIK3Q9Y2K2 1263 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 STXBP5LQ9Y2K9 1186 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 BACE2Q9Y5Z0 518 aa15□□□□□ -0.01
VIPAS39-208ENST00000556412 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 OR6C75A6NL08 312 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 GABRDO14764 452 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 LILRB3O75022 631 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 ADH1AP07327 375 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 KRT5P13647 590 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 PCSK1P29120 753 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 USP8P40818 1118 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 NRIP1P48552 1158 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 NDUFV1P49821 464 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 YWHAEP62258 255 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 TSPY1Q01534 308 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 IQCEQ6IPM2 695 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 PPP2R3CQ969Q6 453 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 KREMEN1Q96MU8 473 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 SYT15Q9BQS2 421 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 DPEP3Q9H4B8 488 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 NSUN3Q9H649 340 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 IGFLR1Q9H665 355 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 RXFP1Q9HBX9 757 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 AJAP1Q9UKB5 411 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms