RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ZNF785A8K8V0 405 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 F5H697 171 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 DRD4P21917 467 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 PCSK6P29122 969 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 NDUFV1P49821 464 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 PSMC1P62191 440 aaKnown RBP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 PCBP2Q15366 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 EZH2Q15910 746 aaKnown RBP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 KHDC1Q4VXA5 237 aaKnown RBP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 SYDE2Q5VT97 1194 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 SLC4A10Q6U841 1118 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 ZNF782Q6ZMW2 699 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 PDSS2Q86YH6 399 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 FKBP10Q96AY3 582 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 TPSD1Q9BZJ3 242 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 SERGEFQ9UGK8 458 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 TRHDEQ9UKU6 1024 aa5.35□□□□□ -1.55
SCFD1-217ENST00000555953 CFAP20Q9Y6A4 193 aaKnown RBP5.35□□□□□ -1.55
SCFD1-217ENST00000555953 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 GJB1P08034 283 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 EBLN1P0CF75 366 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 CCT8P50990 548 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 DSC2Q02487 901 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 SLC10A2Q12908 348 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-217ENST00000555953 LLGL1Q15334 1064 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 TMEM119Q4V9L6 283 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 TAF2Q6P1X5 1199 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 VGLL2Q8N8G2 317 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-217ENST00000555953 PSD4Q8NDX1 1056 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 SEMA6DQ8NFY4 1073 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 OSBPL9Q96SU4 736 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 ACTRT3Q9BYD9 372 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 AMBRA1Q9C0C7 1298 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 BRD9Q9H8M2 597 aa5.34□□□□□ -1.55
SCFD1-217ENST00000555953 SIDT1Q9NXL6 827 aaKnown RBP5.34□□□□□ -1.55
SCFD1-217ENST00000555953 LRRC14BA6NHZ5 514 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 TRIAP1O43715 76 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 HNRNPCP07910 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 ZFXP17010 805 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 CHRM3P20309 590 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 ZNF135P52742 658 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 SSBP2P81877 361 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 UAP1L1Q3KQV9 507 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 RBM20Q5T481 1227 aaKnown RBP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 EGFLAMQ63HQ2 1017 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 BHLHA9Q7RTU4 235 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 TTC7BQ86TV6 843 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 C9orf106Q8NAJ2 232 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 CCDC8Q9H0W5 538 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-217ENST00000555953 TMX1Q9H3N1 280 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 MAN1C1Q9NR34 630 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 EHD3Q9NZN3 535 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 AGAP1Q9UPQ3 857 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 ATP8A1Q9Y2Q0 1164 aa5.33□□□□□ -1.56
SCFD1-217ENST00000555953 TARM1B6A8C7 271 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 RPLP2P05387 115 aaKnown RBP5.32□□□□□ -1.56
SCFD1-217ENST00000555953 GNAI3P08754 354 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 CYP2C19P33261 490 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 TOB1P50616 345 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-217ENST00000555953 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 GNAI1P63096 354 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 KRT85P78386 507 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 EIF2B5Q13144 721 aaKnown RBP5.32□□□□□ -1.56
SCFD1-217ENST00000555953 GRM1Q13255 1194 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 MTMR1Q13613 665 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 HABP2Q14520 560 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-217ENST00000555953 TBCCQ15814 346 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 MTX3Q5HYI7 312 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 ZNF626Q68DY1 528 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 ZNF366Q8N895 744 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 GPR35Q9HC97 309 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 SERTAD4Q9NUC0 356 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 CFAP97Q9P2B7 532 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
SCFD1-217ENST00000555953 MRFAP1Q9Y605 127 aa5.32□□□□□ -1.56
SCFD1-217ENST00000555953 ZNF804BA4D1E1 1349 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 SHTN1A0MZ66 631 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 GABRDO14764 452 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 TP73O15350 636 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 VPS4BO75351 444 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 LATS1O95835 1130 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 CHEK2O96017 543 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 PRR35P0CG20 571 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 JUPP14923 745 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 PHKA1P46020 1223 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 FXR1P51114 621 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCFD1-217ENST00000555953 VPS53Q5VIR6 699 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 FAM109AQ8N4B1 249 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 C1orf43Q9BWL3 253 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
SCFD1-217ENST00000555953 SETD1BQ9UPS6 1966 aaKnown RBP5.3□□□□□ -1.56
SCFD1-217ENST00000555953 PROB1E7EW31 1015 aa5.3□□□□□ -1.56
SCFD1-217ENST00000555953 KIF20AO95235 890 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms