RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RRP1BQ14684 758 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 PRKD1Q15139 912 aaPredicted RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 MED25Q71SY5 747 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 TMPRSS6Q8IU80 811 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 CELF5Q8N6W0 485 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 CHST13Q8NET6 341 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 DDX17Q92841 729 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 TNPO1Q92973 898 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 SUCLG2Q96I99 432 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 KLHL32Q96NJ5 620 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 NEU1Q99519 415 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 TRIM54Q9BYV2 358 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 KLC2Q9H0B6 622 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 NUP62CLQ9H1M0 184 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 DEF6Q9H4E7 631 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 CHST12Q9NRB3 414 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 SMPD4Q9NXE4 827 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 ST6GALNAC2Q9UJ37 374 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 TPCN1Q9ULQ1 816 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 SLC45A2Q9UMX9 530 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 CHST2Q9Y4C5 530 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 MED14O60244 1454 aa4.18□□□□□ -1.74
SRP54-209ENST00000555746 SCAF11Q99590 1463 aaKnown RBP4.18□□□□□ -1.74
SRP54-209ENST00000555746 SHPRHQ149N8 1683 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 CAMTA1Q9Y6Y1 1673 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 MUSKO15146 869 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 PMM2O15305 246 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 ITGB1P05556 798 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 THP07101 528 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 NBPF7P0C2Y1 421 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 APOBEC3AP31941 199 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 MAGEA10P43363 369 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 NHLH2Q02577 135 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 PICALMQ13492 652 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 HDAC1Q13547 482 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 CNGB1Q14028 1251 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 PPP4R4Q6NUP7 873 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 ZNF585AQ6P3V2 769 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 TMIEQ8NEW7 156 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 TBC1D15Q8TC07 691 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 PHKBQ93100 1093 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 C8orf49Q96NF6 230 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 CDK5RAP1Q96SZ6 601 aaKnown RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 NAA15Q9BXJ9 866 aaKnown RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 REXO4Q9GZR2 422 aaKnown RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 ZNF703Q9H7S9 590 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 USP25Q9UHP3 1055 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 CPA4Q9UI42 421 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 FAM50BQ9Y247 325 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 PCDHGB6Q9Y5F9 930 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 USP19O94966 1318 aa4.17□□□□□ -1.74
SRP54-209ENST00000555746 DNMT1P26358 1616 aaKnown RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 COL16A1Q07092 1604 aaPredicted RBP4.17□□□□□ -1.74
SRP54-209ENST00000555746 PDE4DIPQ5VU43 2346 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 RTEL1-TNFRSF6BF6WH68 1400 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 E9PLN8 166 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 FOXN3O00409 490 aaPredicted RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 TBX3O15119 743 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 PQBP1O60828 265 aaKnown RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 DNAJB5O75953 348 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 ABHD16AO95870 558 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 KITP10721 976 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 SLC7A1P30825 629 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 TM4SF4P48230 202 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 NOMO3P69849 1222 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 POU6F2P78424 691 aaPredicted RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 CRHR2Q13324 411 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 TOB2Q14106 344 aaPredicted RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 HABP2Q14520 560 aaPredicted RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 CDSNQ15517 529 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 CNGA2Q16280 664 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 RABL3Q5HYI8 236 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 NOMO2Q5JPE7 1267 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 PPP1R32Q7Z5V6 425 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 DVL3Q92997 716 aaPredicted RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 NMD3Q96D46 503 aaKnown RBP4.16□□□□□ -1.74
SRP54-209ENST00000555746 PGBD4Q96DM1 585 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 MSLNLQ96KJ4 702 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 PNKPQ96T60 521 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 VKORC1Q9BQB6 163 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 SIK2Q9H0K1 926 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 SMURF2Q9HAU4 748 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 SLAMF7Q9NQ25 335 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 KLHL11Q9NVR0 708 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 PAXBP1Q9Y5B6 917 aa4.16□□□□□ -1.74
SRP54-209ENST00000555746 CFAP74Q9C0B2 1584 aa4.15□□□□□ -1.74
SRP54-209ENST00000555746 REREQ9P2R6 1566 aa4.15□□□□□ -1.74
SRP54-209ENST00000555746 ZNF785A8K8V0 405 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 AHRRA9YTQ3 701 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 ZNF185O15231 689 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 RECQL4O94761 1208 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 GNAI2P04899 355 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 FCER1AP12319 257 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 PHKA1P46020 1223 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 PTTG1IPP53801 180 aa4.15□□□□□ -1.75
SRP54-209ENST00000555746 SUMO3P55854 103 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms