RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NFIL3Q16649 462 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 TPGS2Q68CL5 300 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 BMP8AQ7Z5Y6 402 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 UBALD2Q8IYN6 164 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 SAAL1Q96ER3 474 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 ASIC4Q96FT7 647 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 CEP63Q96MT8 703 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 MYADMQ96S97 322 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-215ENST00000555616 KCNH6Q9H252 994 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 THAP9Q9H5L6 903 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 AGPAT3Q9NRZ7 376 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 RBAKQ9NYW8 714 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-215ENST00000555616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.38□□□□□ -0.759e-7■■■■■ 31.9
ACTN1-215ENST00000555616 MAGEC2Q9UBF1 373 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-215ENST00000555616 RAPGEFL1Q9UHV5 662 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 MAFFQ9ULX9 164 aa10.38□□□□□ -0.75
ACTN1-215ENST00000555616 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 CETN3O15182 167 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 CCL16O15467 120 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 TGFB1I1O43294 461 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 GNA14O95837 355 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 CYP11A1P05108 521 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 ODC1P11926 461 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 FSHRP23945 695 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 ADAM9Q13443 819 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 NCAPHQ15003 741 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 ARMCX5Q6P1M9 558 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 GET4Q7L5D6 327 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 GRASPQ7Z6J2 395 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 C12orf56Q8IXR9 622 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 TCEAL8Q8IYN2 117 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 GPD1LQ8N335 351 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 ZSWIM2Q8NEG5 633 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 MED15Q96RN5 788 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 SRRTQ9BXP5 876 aaKnown RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 FANCLQ9NW38 375 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 DPP3Q9NY33 737 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 IGSF9Q9P2J2 1179 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 AFF4Q9UHB7 1163 aaKnown RBP10.37□□□□□ -0.75
ACTN1-215ENST00000555616 INSL5Q9Y5Q6 135 aa10.37□□□□□ -0.75
ACTN1-215ENST00000555616 ANK1P16157 1881 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 GOLGA8JA6NMD2 632 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 PRRG1O14668 218 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 SLC16A3O15427 465 aaKnown RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 TPM2P07951 284 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 LAMP2P13473 410 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 CPB1P15086 417 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 EEF1GP26641 437 aaKnown RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 GBP2P32456 591 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 PNPLA4P41247 253 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 TAF6P49848 677 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 ARPP19P56211 112 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 NTHL1P78549 312 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 OVOS1Q6IE37 1185 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 DSTYKQ6XUX3 929 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 USP37Q86T82 979 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 SLC9A9Q8IVB4 645 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 ZC3H3Q8IXZ2 948 aaKnown RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 CXorf38Q8TB03 319 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 TMEM174Q8WUU8 243 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 SENP8Q96LD8 212 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 MFSD14AQ96MC6 490 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 ZNF560Q96MR9 790 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 KIAA1586Q9HCI6 787 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 AVENQ9NQS1 362 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 SAMSN1Q9NSI8 373 aaKnown RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 DSEQ9UL01 958 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 FRMD4BQ9Y2L6 1034 aa10.36□□□□□ -0.75
ACTN1-215ENST00000555616 TIMM13Q9Y5L4 95 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 ZFP37Q9Y6Q3 630 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 MTCL1Q9Y4B5 1905 aaKnown RBP10.36□□□□□ -0.75
ACTN1-215ENST00000555616 KCNJ18B7U540 433 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ANHXE9PGG2 379 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CLIC2O15247 247 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 EXOC3O60645 756 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 SEC24AO95486 1093 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 VNN2O95498 520 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 LRG1P02750 347 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 TPM3P06753 285 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ZNF18P17022 549 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ELF1P32519 619 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 PSMC2P35998 433 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CYP2J2P51589 502 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 TFAMQ00059 246 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ADCY1Q08828 1119 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 GPR17Q13304 367 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 TDGQ13569 410 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 HTR4Q13639 388 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms