RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 SPTLC1O15269 473 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 TRAPPC3O43617 180 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 KIF5CO60282 957 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 URI1O94763 535 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 FGFR1OPO95684 399 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 SOD2P04179 222 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 LRPAP1P30533 357 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 NRIP1P48552 1158 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 GLUD2P49448 558 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 ARPP19P56211 112 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 LILRA4P59901 499 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 POU5F1Q01860 360 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 UBE3AQ05086 875 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 TRPC3Q13507 836 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 SMC1AQ14683 1233 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 NFIL3Q16649 462 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 RAD9BQ6WBX8 426 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 INTS8Q75QN2 995 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 UBE2Q2Q8WVN8 375 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 TTPALQ9BTX7 342 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 HERC2P3Q9BVR0 1158 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 LMAN2LQ9H0V9 348 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 NSUN3Q9H649 340 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 TLE6Q9H808 572 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 ARMCX3Q9UH62 379 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-213ENST00000555386 SIX4Q9UIU6 781 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 ITGA11Q9UKX5 1188 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 LZTS1Q9Y250 596 aa10.58□□□□□ -0.72
PSEN1-213ENST00000555386 C2orf71A6NGG8 1288 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 PIRO00625 290 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 CST3P01034 146 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-213ENST00000555386 CTSAP10619 480 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 H2AFXP16104 143 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-213ENST00000555386 PIK3CAP42336 1068 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 TAF6P49848 677 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 RBP5P82980 135 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 PPP3CAQ08209 521 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 ELF2Q15723 593 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
PSEN1-213ENST00000555386 FIGNQ5HY92 759 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 C1orf220Q5T0J3 134 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
PSEN1-213ENST00000555386 USP37Q86T82 979 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 OR8K1Q8NGG5 319 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 MAFAQ8NHW3 353 aaPredicted RBP10.57□□□□□ -0.72
PSEN1-213ENST00000555386 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 UBXN4Q92575 508 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 HPDLQ96IR7 371 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 SENP8Q96LD8 212 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 TSPAN18Q96SJ8 248 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 DNAJC7Q99615 494 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 CAPN11Q9UMQ6 739 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 MRFAP1Q9Y605 127 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 UNC80Q8N2C7 3258 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 PLXNA3P51805 1871 aa10.57□□□□□ -0.72
PSEN1-213ENST00000555386 ANO9A1A5B4 782 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 PES1O00541 588 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 CYB561D2O14569 222 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 FSCN2O14926 492 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 FANCGO15287 622 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SLC16A3O15427 465 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 TADA3O75528 432 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SPATA31D3P0C874 917 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 KLRC2P26717 231 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 KRT9P35527 623 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 MTIF2P46199 727 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 MYL6P60660 151 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 ELAVL2Q12926 359 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 NCOA4Q13772 614 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 PSMD5Q16401 504 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SV2CQ496J9 727 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SCARA5Q6ZMJ2 495 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SPATA31D4Q6ZUB0 917 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 PALB2Q86YC2 1186 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 MRPL43Q8N983 215 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 CNOT6LQ96LI5 555 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 ZNF560Q96MR9 790 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 WDR24Q96S15 920 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 MMS19Q96T76 1030 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 TUBGCP2Q9BSJ2 902 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 DESI2Q9BSY9 194 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 NGRNQ9NPE2 291 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 ARGLU1Q9NWB6 273 aaPredicted RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
PSEN1-213ENST00000555386 SNX9Q9Y5X1 595 aa10.56□□□□□ -0.72
PSEN1-213ENST00000555386 A0A1W2PQJ5 194 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms