RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	ZNF606	Q8WXB4	792 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	LRRC19	Q9H756	370 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	APOBEC3G	Q9HC16	384 aa	Known RBP	12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	CNOT7	Q9UIV1	285 aa	Known RBP	12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	ZNF536	O15090	1300 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	CST3	P01034	146 aa	Predicted RBP	12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	ADRA1D	P25100	572 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	EPHB2	P29323	1055 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	SFN	P31947	248 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	PLCB4	Q15147	1175 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	ZNF699	Q32M78	642 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	ANKRD20A3	Q5VUR7	823 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	PPM1N	Q8N819	430 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	PSPC1	Q8WXF1	523 aa	Known RBP	12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	YIPF3	Q9GZM5	350 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	PARVA	Q9NVD7	372 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	GPATCH2L	Q9NWQ4	482 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	UBIAD1	Q9Y5Z9	338 aa		12.51	□□□□□ -0.41
XRCC3-208	ENST00000554811	WDR46	O15213	610 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ZBTB7A	O95365	584 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MAN1A1	P33908	653 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	CTCF	P49711	727 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	GPC3	P51654	580 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	DRG2	P55039	364 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SPDYE2	Q495Y8	402 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	LONP2	Q86WA8	852 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ACTL9	Q8TC94	416 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SPDL1	Q96EA4	605 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MYOZ2	Q9NPC6	264 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	STK32B	Q9NY57	414 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MT-ND3	P03897	115 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	OTUD4	Q01804	1114 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ITIH4	Q14624	930 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	CIAPIN1	Q6FI81	312 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SEC14L1	Q92503	715 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	VTI1A	Q96AJ9	217 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	TRIM11	Q96F44	468 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	DDX27	Q96GQ7	796 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	RILP	Q96NA2	401 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	NUDCD1	Q96RS6	583 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	CYTH2	Q99418	400 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ZFP69B	Q9UJL9	534 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	POLI	Q9UNA4	740 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ARFGEF1	Q9Y6D6	1849 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	TTLL13P	A6NNM8	815 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MAPT	P10636	758 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	FSTL1	Q12841	308 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SIX1	Q15475	284 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	PREPL	Q4J6C6	727 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	DEFB132	Q7Z7B7	95 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MTDH	Q86UE4	582 aa	Known RBP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	ECHDC2	Q86YB7	292 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	HIPK4	Q8NE63	616 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	MORC4	Q8TE76	937 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	TXLNGY	Q9BZA5	131 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SHCBP1L	Q9BZQ2	653 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	DEFB129	Q9H1M3	183 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	XPNPEP1	Q9NQW7	623 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	SCIN	Q9Y6U3	715 aa		12.5	□□□□□ -0.41
XRCC3-208	ENST00000554811	EXTL3	O43909	919 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	INHBA	P08476	426 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	XRCC4	Q13426	336 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	STAT4	Q14765	748 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	MUM1	Q2TAK8	710 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	OR6B2	Q6IFH4	312 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	RPAIN	Q86UA6	219 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	ABRA	Q8N0Z2	381 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	C7orf31	Q8N865	590 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	TMEM35B	Q8NCS4	154 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	CKAP2	Q8WWK9	683 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	C5orf60	A6NFR6	353 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	ENO4	A6NNW6	628 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	MAPK13	O15264	365 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	BAG2	O95816	211 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	PAEP	P09466	180 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	FDX1	P10109	184 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	TROVE2	P10155	538 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	PTK6	Q13882	451 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	KRT81	Q14533	505 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	SLC1A5	Q15758	541 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	SWT1	Q5T5J6	900 aa	Known RBP	12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	CD101	Q93033	1021 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	APOL6	Q9BWW8	343 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	KIAA1586	Q9HCI6	787 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	ARMCX1	Q9P291	453 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	IP6K2	Q9UHH9	426 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	AVIL	O75366	819 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	RNF8	O76064	485 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	CD48	P09326	243 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	KRT3	P12035	628 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	HSD17B4	P51659	736 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	WDR4	P57081	412 aa	Known RBP	12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	TAF5	Q15542	800 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	TAF1B	Q53T94	588 aa	Predicted RBP	12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	NPNT	Q6UXI9	565 aa		12.49	□□□□□ -0.41
XRCC3-208	ENST00000554811	GADL1	Q6ZQY3	521 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms