RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TRIM29Q14134 588 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 ACAP1Q15027 740 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 KIAA0753Q2KHM9 967 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 KBTBD12Q3ZCT8 623 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CC2D1AQ6P1N0 951 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SEPT14Q6ZU15 432 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SRLQ86TD4 932 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 PNMA8AQ86V59 439 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SPATS2Q86XZ4 545 aaKnown RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 FAM114A1Q8IWE2 563 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CCDC146Q8IYE0 955 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 BCL6BQ8N143 479 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 GOLGA1Q92805 767 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 TANGO6Q9C0B7 1094 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 DHX36Q9H2U1 1008 aaKnown RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SLC2A4RGQ9NR83 387 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 HOMER3Q9NSC5 361 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CHMP5Q9NZZ3 219 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CHPF2Q9P2E5 772 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 ZMAT5Q9UDW3 170 aaKnown RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 TMCC3Q9ULS5 477 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 COQ6Q9Y2Z9 468 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 V9GYY5 206 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-227ENST00000554491 SZT2Q5T011 3432 aa4.93□□□□□ -1.62
ATXN3-227ENST00000554491 CEP290O15078 2479 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 A0A1W2PP64 1363 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 NPC1L1Q9UHC9 1359 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 FOXP2O15409 715 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 MTRF1O75570 445 aaKnown RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 RASGRP1O95267 797 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 IVLP07476 585 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 IGBP1P78318 339 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 RIN1Q13671 783 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 RRP1BQ14684 758 aaKnown RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 PCSK4Q6UW60 755 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 SYT10Q6XYQ8 523 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 CTU1Q7Z7A3 348 aaKnown RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 C2CD5Q86YS7 1000 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 NDUFAF2Q8N183 169 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 HIPK4Q8NE63 616 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 NACC2Q96BF6 587 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 CLIP3Q96DZ5 547 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 SCLT1Q96NL6 688 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 RPAP3Q9H6T3 665 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 SLC52A2Q9HAB3 445 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 KCNH7Q9NS40 1196 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF446Q9NWS9 450 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 C6orf203Q9P0P8 240 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 MAFFQ9ULX9 164 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 GIT1Q9Y2X7 761 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 REXO2Q9Y3B8 237 aaKnown RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 MRPS23Q9Y3D9 190 aaKnown RBP4.92□□□□□ -1.62
ATXN3-227ENST00000554491 N6AMT1Q9Y5N5 214 aa4.92□□□□□ -1.62
ATXN3-227ENST00000554491 hCG_2014768A0A024R1R8 64 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 MYL1P05976 194 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 CD53P19397 219 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 SMARCA1P28370 1054 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ELF1P32519 619 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 AMPHP49418 695 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF131P52739 623 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 NANOS3P60323 173 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 NSUN2Q08J23 767 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ADAM15Q13444 863 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 NEDD9Q14511 834 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 IQCB1Q15051 598 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ZRSR1Q15695 479 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 SEPT7Q16181 437 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 CLPPQ16740 277 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 CATSPEREQ5SY80 951 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 SPATA21Q7Z572 469 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 KIAA1328Q86T90 577 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 TMPRSS6Q8IU80 811 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ANKRD18AQ8IVF6 992 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 CKAP2LQ8IYA6 745 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 CHCHD4Q8N4Q1 142 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 TRIML1Q8N9V2 468 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 FBXO18Q8NFZ0 1043 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 KIF18AQ8NI77 898 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 GABPB2Q8TAK5 448 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 ERMNQ8TAM6 284 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 GOLGA5Q8TBA6 731 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 TBC1D5Q92609 795 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 JAKMIP2Q96AA8 810 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 KIF1BPQ96EK5 621 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 DHTKD1Q96HY7 919 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 RBM17Q96I25 401 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 GSDMAQ96QA5 445 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 AGAP2Q99490 1192 aa4.91□□□□□ -1.62
ATXN3-227ENST00000554491 NAP1L4Q99733 375 aaKnown RBP4.91□□□□□ -1.62
ATXN3-227ENST00000554491 DHRS4Q9BTZ2 278 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms