RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CCDC137Q6PK04 289 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ANKMY2Q8IV38 441 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 RHOT2Q8IXI1 618 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SPERTQ8NA61 448 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PCYOX1LQ8NBM8 494 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 RNF169Q8NCN4 708 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ICA1LQ8NDH6 482 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PYDC1Q8WXC3 89 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 MTBPQ96DY7 904 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 WHRNQ9P202 907 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 IGSF9Q9P2J2 1179 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SYNGAP1Q96PV0 1343 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 CAPN14A8MX76 684 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 RSPH10B2B2RC85 870 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 H3BRJ5 948 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 FCHO1O14526 889 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 TEX28O15482 410 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZBED4O75132 1171 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZBTB11O95625 1053 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 LDHCP07864 332 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 RSPH10BP0C881 870 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PLCG1P19174 1290 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 GCAP28676 217 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SERPINB6P35237 376 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 RPA3P35244 121 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 ADD2P35612 726 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SLC5A3P53794 718 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PSMD6Q15008 389 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZNF829Q3KNS6 432 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 CCSAPQ6IQ19 270 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 FAM20CQ8IXL6 584 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PPM1KQ8N3J5 372 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 GUF1Q8N442 669 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZNF276Q8N554 614 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 OR7G1Q8NGA0 311 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 TMEM120AQ9BXJ8 343 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 PIH1D3Q9NQM4 214 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 MKS1Q9NXB0 559 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 ARPP21Q9UBL0 812 aaPredicted RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 MTUS1Q9ULD2 1270 aa10.04□□□□□ -0.8
SIX4-202ENST00000554079 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
SIX4-202ENST00000554079 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 STRCP1A6NGW2 1772 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 A0A0G2JND7 137 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 PDE8AO60658 829 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 CSDE1O75534 798 aaKnown RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 STAMBPO95630 424 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 PCCAP05165 728 aaPredicted RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 PDE6AP16499 860 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 ZNF23P17027 643 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 HMOX2P30519 316 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 WASHC5Q12768 1159 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 OVGP1Q12889 678 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 CCNIQ14094 377 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 STAT4Q14765 748 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 ARHGEF6Q15052 776 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 LRRC24Q50LG9 513 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 WDR45BQ5MNZ6 344 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 OGFOD2Q6N063 350 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 TPTE2Q6XPS3 522 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 NLRP10Q86W26 655 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 SIX5Q8N196 739 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 POU5F2Q8N7G0 328 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 DCUN1D1Q96GG9 259 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 THTPAQ9BU02 230 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 CNNM2Q9H8M5 875 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 EPB41L4AQ9HCS5 686 aaPredicted RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 AMOTL2Q9Y2J4 779 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 MTO1Q9Y2Z2 717 aaKnown RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 DTNAQ9Y4J8 743 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 LRP5O75197 1615 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
SIX4-202ENST00000554079 TECPR2O15040 1411 aa10.03□□□□□ -0.8
SIX4-202ENST00000554079 CAPN8A6NHC0 703 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 POTECB2RU33 542 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 CYP26A1O43174 497 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 THAP12O43422 761 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 TYROBPO43914 113 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 RSL1D1O76021 490 aaKnown RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 CRTAMO95727 393 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 GGPS1O95749 300 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 ADORA1P30542 326 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms