RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TXLNBQ8N3L3 684 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 ZNF527Q8NB42 609 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 OR5M3Q8NGP4 307 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 OR6B3Q8NGW1 331 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 MDM1Q8TC05 714 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 LPPQ93052 612 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 CARD11Q9BXL7 1154 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 ACTL7AQ9Y615 435 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPSF6-206ENST00000550987 BDP1A6H8Y1 2624 aa6.32□□□□□ -1.4
CPSF6-206ENST00000550987 QRICH2Q9H0J4 1663 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 MYOCOSA0A1B0GUC4 107 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 F2RL2O00254 374 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ADCY6O43306 1168 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 FGF18O76093 207 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 AHSGP02765 367 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 GNAI3P08754 354 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 RAP2AP10114 183 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 IGFBP6P24592 240 aaPredicted RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 PRDX5P30044 214 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 CCT5P48643 541 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 RENBPP51606 427 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 EPHB3P54753 998 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 GNAI1P63096 354 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ICA1Q05084 483 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 SLC44A4Q53GD3 710 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 TRMT2AQ8IZ69 625 aaKnown RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 DEFB123Q8N688 67 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 MYCT1Q8N699 235 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ZCCHC14Q8WYQ9 949 aaKnown RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 KCNN1Q92952 543 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ZNF566Q969W8 418 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 SLC7A6OSQ96CW6 309 aaPredicted RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 C1orf43Q9BWL3 253 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 MRPL46Q9H2W6 279 aaKnown RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 KCNK12Q9HB15 430 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 AFF4Q9UHB7 1163 aaKnown RBP6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ANAPC4Q9UJX5 808 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 PNMA2Q9UL42 364 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 ZDHHC9Q9Y397 364 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 USP6P35125 1406 aa6.31□□□□□ -1.4
CPSF6-206ENST00000550987 KIAA1551Q9HCM1 1747 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 A0A087WV62 115 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 NRP1O14786 923 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 TOX4O94842 621 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 KLHL18O94889 574 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 JUNP05412 331 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 CD1AP06126 327 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 HARSP12081 509 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 COL6A1P12109 1028 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 EN2P19622 333 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 PCSK1P29120 753 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 IL6STP40189 918 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 PIK3CGP48736 1102 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 SOX8P57073 446 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 BPIFB4P59827 614 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 NOMO3P69849 1222 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 MTM1Q13496 603 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 PUM3Q15397 648 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 C3orf38Q5JPI3 329 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 DACT2Q5SW24 774 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 ZFYVE27Q5T4F4 411 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 ZNF783Q6ZMS7 281 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 Q7L0L9 218 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 NKAPQ8N5F7 415 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 CELF5Q8N6W0 485 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 ATP11CQ8NB49 1132 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 PCSK9Q8NBP7 692 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 NUDT10Q8NFP7 164 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 CASKIN2Q8WXE0 1202 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 PAGR1Q9BTK6 254 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 TMEM168Q9H0V1 697 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 EPC1Q9H2F5 836 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 BARX1Q9HBU1 254 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 SIDT1Q9NXL6 827 aaKnown RBP6.3□□□□□ -1.4
CPSF6-206ENST00000550987 RNF181Q9P0P0 153 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 SBF1O95248 1867 aa6.3□□□□□ -1.4
CPSF6-206ENST00000550987 MYO5BQ9ULV0 1848 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 RBBP6Q7Z6E9 1792 aaKnown RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ANKRD11Q6UB99 2663 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 FFAR2O15552 330 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 SEMA7AO75326 666 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 SASH1O94885 1247 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PAPLNO95428 1278 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 MTHFD1P11586 935 aaKnown RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 TSHRP16473 764 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ITGB5P18084 799 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 HDCP19113 662 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms