RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
HCFC2-204ENST00000550335 A0A087WWL8 130 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 TBKBP1A7MCY6 615 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 PJA2O43164 708 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 MED25Q71SY5 747 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 PDSS2Q86YH6 399 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 ZFP28Q8NHY6 868 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 SCAMP4Q969E2 229 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 PRPF18Q99633 342 aaKnown RBP6.73□□□□□ -1.33
HCFC2-204ENST00000550335 DPYSL5Q9BPU6 564 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 HEYLQ9NQ87 328 aaPredicted RBP6.73□□□□□ -1.33
HCFC2-204ENST00000550335 MRPS18AQ9NVS2 196 aaKnown RBP6.73□□□□□ -1.33
HCFC2-204ENST00000550335 RGL1Q9NZL6 768 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 IGSF9Q9P2J2 1179 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 PAXBP1Q9Y5B6 917 aa6.73□□□□□ -1.33
HCFC2-204ENST00000550335 MROH6A6NGR9 719 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 RRN3P2A6NIE6 340 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 B5MCH6 92 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 H7C4K7 107 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 RFXAPO00287 272 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 EIF3FO00303 357 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 FFAR3O14843 346 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 IRAK2O43187 625 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 CDC14BO60729 498 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 CENPBP07199 599 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 PIM1P11309 404 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 BTF3P20290 206 aaKnown RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 CHRM3P20309 590 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SERPINF1P36955 418 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 RAC3P60763 192 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 BMT2Q1RMZ1 405 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 FAM26FQ5R3K3 315 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 ANKRD45Q5TZF3 282 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 FAM160B1Q5W0V3 765 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SPTY2D1Q68D10 685 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SULT6B1Q6IMI4 303 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 EFCAB12Q6NXP0 572 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 JMJD6Q6NYC1 403 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 FAM111BQ6SJ93 734 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 GALNT15Q8N3T1 639 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 NSUN7Q8NE18 718 aaKnown RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 MPP4Q96JB8 637 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SNX27Q96L92 541 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 UBXN10Q96LJ8 280 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 ZNF512Q96ME7 567 aaPredicted RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SIK2Q9H0K1 926 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 AGO3Q9H9G7 860 aaKnown RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 GPR35Q9HC97 309 aa6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SCAF8Q9UPN6 1271 aaKnown RBP6.72□□□□□ -1.33
HCFC2-204ENST00000550335 SH3D21A4FU49 640 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 EPB41L2O43491 1005 aaKnown RBP6.71□□□□□ -1.34
HCFC2-204ENST00000550335 USP1O94782 785 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 ANXA1P04083 346 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 TPH1P17752 444 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 CNTFP26441 200 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 ACVR2AP27037 513 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 ARL4CP56559 192 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 NFYCQ13952 458 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 PTK2BQ14289 1009 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 ZNF385BQ569K4 471 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 CRTC1Q6UUV9 634 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 FAM83AQ86UY5 434 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 FAM124AQ86V42 546 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 CCDC117Q8IWD4 279 aaPredicted RBP6.71□□□□□ -1.34
HCFC2-204ENST00000550335 VGLL2Q8N8G2 317 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 PDPRQ8NCN5 879 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 CFHR4Q92496 578 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 TBATAQ96M53 351 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 KLHL32Q96NJ5 620 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 LRRC37BQ96QE4 947 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 PPP1R9BQ96SB3 815 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 PCDHAC1Q9H158 963 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 VPS45Q9NRW7 570 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 ZMYND8Q9ULU4 1186 aaPredicted RBP6.71□□□□□ -1.34
HCFC2-204ENST00000550335 CDYLQ9Y232 598 aa6.71□□□□□ -1.34
HCFC2-204ENST00000550335 LRRFIP2Q9Y608 721 aaKnown RBP6.71□□□□□ -1.34
HCFC2-204ENST00000550335 HMX3A6NHT5 357 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 CLCA1A8K7I4 914 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 IPO5O00410 1097 aaKnown RBP6.7□□□□□ -1.34
HCFC2-204ENST00000550335 POLRMTO00411 1230 aaKnown RBP6.7□□□□□ -1.34
HCFC2-204ENST00000550335 SYT5O00445 386 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 A1BGP04217 495 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 GNAT2P19087 354 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 TNFAIP3P21580 790 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 GABRB3P28472 473 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 AFF3P51826 1226 aaKnown RBP6.7□□□□□ -1.34
HCFC2-204ENST00000550335 KRT17Q04695 432 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 G3BP1Q13283 466 aaKnown RBP eCLIP6.7□□□□□ -1.34
HCFC2-204ENST00000550335 PLA1AQ53H76 456 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 NOMO2Q5JPE7 1267 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 CACHD1Q5VU97 1274 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 CYP26C1Q6V0L0 522 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 RFX8Q6ZV50 586 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 MAATS1Q7Z4T9 603 aa6.7□□□□□ -1.34
HCFC2-204ENST00000550335 ZNF761Q86XN6 746 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms