RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 KRT39Q6A163 491 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 ELMSAN1Q6PJG2 1045 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 TCEAL8Q8IYN2 117 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 ZCWPW1Q9H0M4 648 aa12.79□□□□□ -0.36
PFDN5-208ENST00000549995 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
PFDN5-208ENST00000549995 GREB1Q4ZG55 1949 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 H3BQ06 376 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-208ENST00000549995 P4HA2O15460 535 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 HUS1O60921 280 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 ZMYND10O75800 440 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
PFDN5-208ENST00000549995 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 BMP1P13497 986 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 LHX1P48742 406 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 MXI1P50539 228 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 MYL6P60660 151 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 SGSM1Q2NKQ1 1148 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 OSTM1Q86WC4 334 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 KREMEN2Q8NCW0 462 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
PFDN5-208ENST00000549995 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-208ENST00000549995 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 ADAM7Q9H2U9 754 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-208ENST00000549995 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 OBSL1O75147 1896 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
PFDN5-208ENST00000549995 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-208ENST00000549995 CA8P35219 290 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 GCLMP48507 274 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 STX17P56962 302 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 BIRC3Q13489 604 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 TRPC3Q13507 836 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 ZNF699Q32M78 642 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 CBWD6Q4V339 395 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 CBWD3Q5JTY5 395 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 CBWD5Q5RIA9 395 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 FBXL13Q8NEE6 735 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 ENOX1Q8TC92 643 aaKnown RBP12.77□□□□□ -0.37
PFDN5-208ENST00000549995 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 NECTIN4Q96NY8 510 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.37
PFDN5-208ENST00000549995 AVENQ9NQS1 362 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-208ENST00000549995 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 PRKAG3Q9UGI9 489 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
PFDN5-208ENST00000549995 DOCK8Q8NF50 2099 aa12.77□□□□□ -0.37
PFDN5-208ENST00000549995 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 C8AP07357 584 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 ASPAP45381 313 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 FMO5P49326 533 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 MYL7Q01449 175 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 INCA1Q0VD86 236 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 STX1AQ16623 288 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 WDR72Q3MJ13 1102 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 ZNF667Q5HYK9 610 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 CCDC149Q6ZUS6 474 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 APOBEC3GQ9HC16 384 aaKnown RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 RAB20Q9NX57 234 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-208ENST00000549995 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 NCOR1O75376 2440 aa12.76□□□□□ -0.37
PFDN5-208ENST00000549995 VCANP13611 3396 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 PHACTR2O75167 634 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 SEC24AO95486 1093 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CPB1P15086 417 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 PCSK1P29120 753 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 PIK3CAP42336 1068 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 MTHFRP42898 656 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 KCNQ1P51787 676 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 TNNC1P63316 161 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms