RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PTK2Q05397 1052 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 ZNF394Q53GI3 561 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 C9orf50Q5SZB4 431 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 WSCD1Q658N2 575 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 SLC47A2Q86VL8 602 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 RAD9AQ99638 391 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 SNX25Q9H3E2 840 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 HMGXB4Q9UGU5 601 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 DSEQ9UL01 958 aa30.7■■■□□ 2.51
BRF1-213ENST00000548421 PLEKP08567 350 aaPredicted RBP30.7■■■□□ 2.5
BRF1-213ENST00000548421 CYP11B1P15538 503 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 LAG3P18627 525 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 PBX3P40426 434 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 UNC93AQ86WB7 457 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 OR6B3Q8NGW1 331 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 SPATA18Q8TC71 538 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 EPS8L1Q8TE68 723 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 WHAMMQ8TF30 809 aa30.7■■■□□ 2.5
BRF1-213ENST00000548421 RNPC3Q96LT9 517 aaKnown RBP30.7■■■□□ 2.5
BRF1-213ENST00000548421 NHEJ1Q9H9Q4 299 aaPredicted RBP30.7■■■□□ 2.5
BRF1-213ENST00000548421 SSU72P8A0A1W2PR75 194 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 SOWAHDA6NJG2 315 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 NT5C1B-RDH14C9J2C7 533 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 ARHGAP6O43182 974 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 CYP11A1P05108 521 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 RAD23BP54727 409 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 MAPK8IP2Q13387 824 aaPredicted RBP30.69■■■□□ 2.5
BRF1-213ENST00000548421 KCNT2Q6UVM3 1135 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 ZNF558Q96NG5 402 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 TWNKQ96RR1 684 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 NT5C1AQ9BXI3 368 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 PCDHB8Q9UN66 801 aa30.69■■■□□ 2.5
BRF1-213ENST00000548421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.69■■■□□ 2.5
BRF1-213ENST00000548421 SF3B1O75533 1304 aaKnown RBP eCLIP30.68■■■□□ 2.5
BRF1-213ENST00000548421 TLL1O43897 1013 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 PAEPP09466 180 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 TYMPP19971 482 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 GNA15P30679 374 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 GNL1P36915 607 aaPredicted RBP30.68■■■□□ 2.5
BRF1-213ENST00000548421 FIBCD1Q8N539 461 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 TMEM176AQ96HP8 235 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 ELOVL4Q9GZR5 314 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 ACP6Q9NPH0 428 aa30.68■■■□□ 2.5
BRF1-213ENST00000548421 LAMA2P24043 3122 aaKnown RBP30.68■■■□□ 2.5
BRF1-213ENST00000548421 VWA8A3KMH1 1905 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 A8MXQ7 604 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 GABRDO14764 452 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 EIF4A3P38919 411 aaKnown RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 LHX1P48742 406 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 ELAVL2Q12926 359 aaKnown RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 SHHQ15465 462 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 ZNF571Q7Z3V5 609 aaPredicted RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 NOP9Q86U38 636 aaKnown RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 OSTM1Q86WC4 334 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 TMEM173Q86WV6 379 aaPredicted RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 METTL23Q86XA0 190 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 CCDC170Q8IYT3 715 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 SLC4A11Q8NBS3 891 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 SP7Q8TDD2 431 aaPredicted RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 CCDC42Q96M95 316 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 DNAI2Q9GZS0 605 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 DEF6Q9H4E7 631 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 NOCTQ9UK39 431 aaKnown RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 STXBP5LQ9Y2K9 1186 aa30.67■■■□□ 2.5
BRF1-213ENST00000548421 TIMM13Q9Y5L4 95 aaPredicted RBP30.67■■■□□ 2.5
BRF1-213ENST00000548421 ANXA13P27216 316 aa30.66■■■□□ 2.5
BRF1-213ENST00000548421 FUT10Q6P4F1 479 aa30.66■■■□□ 2.5
BRF1-213ENST00000548421 COLGALT1Q8NBJ5 622 aa30.66■■■□□ 2.5
BRF1-213ENST00000548421 AAASQ9NRG9 546 aa30.66■■■□□ 2.5
BRF1-213ENST00000548421 NME7Q9Y5B8 376 aa30.66■■■□□ 2.5
BRF1-213ENST00000548421 SYN3O14994 580 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 ORC1Q13415 861 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 VPS36Q86VN1 386 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 ZNF677Q86XU0 584 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 SLC20A1Q8WUM9 679 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 BCL7CQ8WUZ0 217 aaPredicted RBP30.65■■■□□ 2.5
BRF1-213ENST00000548421 IGSF21Q96ID5 467 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 AGPAT1Q99943 283 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 GDF15Q99988 308 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 SYT11Q9BT88 431 aa30.65■■■□□ 2.5
BRF1-213ENST00000548421 UBE2OQ9C0C9 1292 aaKnown RBP30.65■■■□□ 2.5
BRF1-213ENST00000548421 LMO2P25791 158 aa30.64■■■□□ 2.5
BRF1-213ENST00000548421 CYLC1P35663 651 aaPredicted RBP30.64■■■□□ 2.5
BRF1-213ENST00000548421 RGS19P49795 217 aa30.64■■■□□ 2.5
BRF1-213ENST00000548421 RAD9BQ6WBX8 426 aa30.64■■■□□ 2.5
BRF1-213ENST00000548421 GPR62Q9BZJ7 368 aa30.64■■■□□ 2.5
BRF1-213ENST00000548421 DDX43Q9NXZ2 648 aaKnown RBP30.64■■■□□ 2.5
BRF1-213ENST00000548421 PUF60Q9UHX1 559 aaKnown RBP30.64■■■□□ 2.5
BRF1-213ENST00000548421 GBF1Q92538 1859 aa30.64■■■□□ 2.5
BRF1-213ENST00000548421 TNRC18O15417 2968 aaPredicted RBP30.64■■■□□ 2.5
BRF1-213ENST00000548421 NLRC5Q86WI3 1866 aa30.64■■■□□ 2.49
BRF1-213ENST00000548421 H0YGN5 161 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 THAP12O43422 761 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 CALCAP01258 141 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 CDR2Q01850 454 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 MLLT1Q03111 559 aaPredicted RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 MTF1Q14872 753 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 ASTE1Q2TB18 679 aaPredicted RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 OVOS1Q6IE37 1185 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 SLC39A11Q8N1S5 342 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms