RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 ACCSQ96QU6 501 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 PKMYT1Q99640 499 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 LPIN3Q9BQK8 851 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 FAM213AQ9BRX8 229 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
GCN1-204ENST00000548132 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 IL21Q9HBE4 155 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 LTB4R2Q9NPC1 389 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 ASAH2Q9NR71 780 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 TMLHEQ9NVH6 421 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
GCN1-204ENST00000548132 GOLGA8IPA6NC78 632 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 GOLGA8JA6NMD2 632 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 IL18RAPO95256 599 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 F13A1P00488 732 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 MYL4P12829 197 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 CD72P21854 359 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 GARTP22102 1010 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 POLR2BP30876 1174 aaKnown RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 VIPR2P41587 438 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 FZD5Q13467 585 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 WSCD1Q658N2 575 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 SLFN12LQ6IEE8 588 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 CNNM4Q6P4Q7 775 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 STKLD1Q8NE28 680 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 PSMG2Q969U7 264 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 PANK4Q9NVE7 773 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 RBAKQ9NYW8 714 aaPredicted RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
GCN1-204ENST00000548132 PTPRZ1P23471 2315 aaPredicted RBP13.45□□□□□ -0.26
GCN1-204ENST00000548132 A0A1W2PRU2 124 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 TADA3O75528 432 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 ITGB3P05106 788 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 ZSCAN22P10073 491 aaPredicted RBP13.44□□□□□ -0.26
GCN1-204ENST00000548132 PRKCQQ04759 706 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 ALCAMQ13740 583 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 SLC39A12Q504Y0 691 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 SLC44A4Q53GD3 710 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 LMBRD2Q68DH5 695 aaPredicted RBP13.44□□□□□ -0.26
GCN1-204ENST00000548132 USP37Q86T82 979 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 TMEM150AQ86TG1 271 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 RIN3Q8TB24 985 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
GCN1-204ENST00000548132 DNASE1L2Q92874 299 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 DHX58Q96C10 678 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 LRRC3BQ96PB8 259 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 IRF2BPLQ9H1B7 796 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 PDE11AQ9HCR9 933 aa13.44□□□□□ -0.26
GCN1-204ENST00000548132 CYB561D2O14569 222 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 TGFB1I1O43294 461 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 EXTL3O43909 919 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 CUTAO60888 179 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 CYP4F8P98187 520 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 LIMS2Q7Z4I7 341 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 NT5DC4Q86YG4 428 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 LEMD2Q8NC56 503 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 OR5B17Q8NGF7 314 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 PCIF1Q9H4Z3 704 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 HSFX1Q9UBD0 423 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 SIT1Q9Y3P8 196 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 R4GN57 208 aa13.43□□□□□ -0.26
GCN1-204ENST00000548132 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 ZNF197O14709 1029 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 EIF3DO15371 548 aaKnown RBP eCLIP13.42□□□□□ -0.26
GCN1-204ENST00000548132 TDGF1P13385 188 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 PAX3P23760 479 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 GPR15P49685 360 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 TFAMQ00059 246 aaKnown RBP13.42□□□□□ -0.26
GCN1-204ENST00000548132 PFKPQ01813 784 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 FCHO2Q0JRZ9 810 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 PLD1Q13393 1074 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 UBXN2BQ14CS0 331 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 POSTNQ15063 836 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
GCN1-204ENST00000548132 SV2CQ496J9 727 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 RESP18Q5W5W9 173 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 IQCEQ6IPM2 695 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
GCN1-204ENST00000548132 GRAMD1CQ8IYS0 662 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 ELMOD1Q8N336 334 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
GCN1-204ENST00000548132 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms