RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RTL10Q7L3V2 364 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 TTC9BQ8N6N2 239 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 SPATA20Q8TB22 786 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 PARD3BQ8TEW8 1205 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 TMEM174Q8WUU8 243 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 MYADMQ96S97 322 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 GDAP2Q9NXN4 497 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 PHACTR2O75167 634 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 AKAP3O75969 853 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 TSPY1Q01534 308 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 DUSP4Q13115 394 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 TRPC3Q13507 836 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 NFIL3Q16649 462 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 PTPN21Q16825 1174 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 PABPC1LQ4VXU2 614 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 ATAD1Q8NBU5 361 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 EEF2KMTQ96G04 330 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 TSG101Q99816 390 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 DDX43Q9NXZ2 648 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
RAB5C-204ENST00000547517 LIMD1Q9UGP4 676 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 MAFFQ9ULX9 164 aa12.7□□□□□ -0.38
RAB5C-204ENST00000547517 BIN1O00499 593 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 HCRTO43612 131 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 SOAT2O75908 522 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 CST3P01034 146 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-204ENST00000547517 RHOP08100 348 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 VAMP7P51809 220 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 AP3M2P53677 418 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 MYL6P60660 151 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TNNC1P63316 161 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 CLDN10P78369 228 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 MYL7Q01449 175 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 PLD1Q13393 1074 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 ADAM9Q13443 819 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 INTS8Q75QN2 995 aaKnown RBP12.69□□□□□ -0.38
RAB5C-204ENST00000547517 OSTM1Q86WC4 334 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 ING5Q8WYH8 240 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 MMS19Q96T76 1030 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 SEPT5Q99719 369 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-204ENST00000547517 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 C1QTNF1Q9BXJ1 281 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 ABI2Q9NYB9 513 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-204ENST00000547517 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
RAB5C-204ENST00000547517 TRIM49BA6NDI0 452 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 PSMA7O14818 248 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 MAPK13O15264 365 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 EPB41P11171 864 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 KRT13P13646 458 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 STIM1Q13586 685 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 MTMR3Q13615 1198 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 NCOA4Q13772 614 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 CAMK4Q16566 473 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 SLC5A9Q2M3M2 681 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 INTS6LQ5JSJ4 861 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 PDZD4Q76G19 769 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 LRRTM3Q86VH5 581 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 ADSSL1Q8N142 457 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 KBTBD7Q8WVZ9 684 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 FGF13Q92913 245 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 SYAP1Q96A49 352 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 GTPBP4Q9BZE4 634 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 C11orf16Q9NQ32 467 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms