RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 OLFML3Q9NRN5 406 aa20.25■□□□□ 0.83
CHPT1-202ENST00000546490 SLC27A5Q9Y2P5 690 aa20.25■□□□□ 0.83
CHPT1-202ENST00000546490 DMXL1Q9Y485 3027 aa20.25■□□□□ 0.83
CHPT1-202ENST00000546490 ZNF263O14978 683 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 KINO60870 393 aaKnown RBP20.24■□□□□ 0.83
CHPT1-202ENST00000546490 IDEP14735 1019 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 ALCAMQ13740 583 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 VEPH1Q14D04 833 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 CRELD2Q6UXH1 353 aaPredicted RBP20.24■□□□□ 0.83
CHPT1-202ENST00000546490 MFSD6LQ8IWD5 586 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 EFCAB13Q8IY85 973 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 TTC9BQ8N6N2 239 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 USP28Q96RU2 1077 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 SEPT5Q99719 369 aaPredicted RBP20.24■□□□□ 0.83
CHPT1-202ENST00000546490 STRA6Q9BX79 667 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 IKZF4Q9H2S9 585 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 ZSCAN16Q9H4T2 348 aaPredicted RBP20.24■□□□□ 0.83
CHPT1-202ENST00000546490 ZNF334Q9HCZ1 680 aaPredicted RBP20.24■□□□□ 0.83
CHPT1-202ENST00000546490 TBC1D7Q9P0N9 293 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 DCHS1Q96JQ0 3298 aa20.24■□□□□ 0.83
CHPT1-202ENST00000546490 F5P12259 2224 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 HEPACAM2A8MVW5 462 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 CYB561D2O14569 222 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 ADSSP30520 456 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 PNPLA4P41247 253 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 MGAT5BQ3V5L5 792 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 ARHGAP15Q53QZ3 475 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 YAF2Q8IY57 180 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 FAM200AQ8TCP9 573 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 C2orf15Q8WU43 125 aaKnown RBP20.23■□□□□ 0.83
CHPT1-202ENST00000546490 HINFPQ9BQA5 517 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 FAM213AQ9BRX8 229 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 ZCWPW1Q9H0M4 648 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 NDRG2Q9UN36 371 aaKnown RBP20.23■□□□□ 0.83
CHPT1-202ENST00000546490 MTMR6Q9Y217 621 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 PCDHB13Q9Y5F0 798 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 PIAS3Q9Y6X2 628 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 NCANO14594 1321 aa20.23■□□□□ 0.83
CHPT1-202ENST00000546490 SOAT2O75908 522 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 LDHAP00338 332 aaKnown RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 GABRR2P28476 465 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 TUFMP49411 452 aaKnown RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 CSTF1Q05048 431 aaKnown RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 KCNA1Q09470 495 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 SLC39A14Q15043 492 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 DNAJB7Q7Z6W7 309 aaPredicted RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 BRSK2Q8IWQ3 736 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 SPPL2BQ8TCT7 592 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 CSGALNACT1Q8TDX6 532 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 MSANTD3Q96H12 275 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 GCNAQ96QF7 691 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 IER2Q9BTL4 223 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 ATXN3LQ9H3M9 355 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 RBAKQ9NYW8 714 aaPredicted RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 PCDHGA2Q9Y5H1 932 aa20.22■□□□□ 0.83
CHPT1-202ENST00000546490 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
CHPT1-202ENST00000546490 OTOGLQ3ZCN5 2332 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 SHISA7A6NL88 538 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 KPNA7A9QM74 516 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
CHPT1-202ENST00000546490 STX6O43752 255 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 GARTP22102 1010 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 CASP5P51878 434 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 STXBP5Q5T5C0 1151 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 FAM3CQ92520 227 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 SAAL1Q96ER3 474 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 PRMT8Q9NR22 394 aaPredicted RBP20.21■□□□□ 0.83
CHPT1-202ENST00000546490 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
CHPT1-202ENST00000546490 TULP1O00294 542 aaPredicted RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 DPYSL4O14531 572 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 CHADO15335 359 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 ATF6P18850 670 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 CDC25CP30307 473 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 NASPP49321 788 aaPredicted RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 FCHO2Q0JRZ9 810 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 STK38Q15208 465 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 TAF12Q16514 161 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 GPR158Q5T848 1215 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 WSCD1Q658N2 575 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 GAREM2Q75VX8 874 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 CCDC65Q8IXS2 484 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 DCP1BQ8IZD4 617 aaKnown RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 RUBCNQ92622 972 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 LPIN3Q9BQK8 851 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 CHRDQ9H2X0 955 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 TMEM206Q9H813 350 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
CHPT1-202ENST00000546490 ABI2Q9NYB9 513 aaPredicted RBP20.2■□□□□ 0.82
CHPT1-202ENST00000546490 A0A087X0B3 334 aa20.19■□□□□ 0.82
CHPT1-202ENST00000546490 ARNTLO00327 626 aa20.19■□□□□ 0.82
CHPT1-202ENST00000546490 ITGB3P05106 788 aa20.19■□□□□ 0.82
CHPT1-202ENST00000546490 POLR2BP30876 1174 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms