RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 ARHGEF38Q9NXL2 777 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 RARGP13631 454 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 PCSK1P29120 753 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 LINC00523Q86TU6 105 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 C4orf33Q8N1A6 199 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 ERP27Q96DN0 273 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 L1RE1Q9UN81 338 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 CHMP2BQ9UQN3 213 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 O00370 1275 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 PDK2Q15119 407 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
COL4A6-209ENST00000545689 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
COL4A6-209ENST00000545689 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 TTC23LQ6PF05 361 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 MAGEB18Q96M61 343 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 CDYLQ9Y232 598 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 KRT33BQ14525 404 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 PDCD6IPQ8WUM4 868 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 UBA6A0AVT1 1052 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 RBP3P10745 1247 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 IL1R1P14778 569 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 CPB1P15086 417 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 NAPEPLDQ6IQ20 393 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ANGPTL8Q6UXH0 198 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 MMTAG2Q9BU76 263 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ELP3Q9H9T3 547 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 KIF17Q9P2E2 1029 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 GRIK1P39086 918 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 RGS7P49802 495 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 TBX2Q13207 712 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 GJB7Q6PEY0 223 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ABTB1Q969K4 478 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ASIC4Q96FT7 647 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 NSL1Q96IY1 281 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
COL4A6-209ENST00000545689 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
COL4A6-209ENST00000545689 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.31
COL4A6-209ENST00000545689 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.31
COL4A6-209ENST00000545689 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.31
COL4A6-209ENST00000545689 F8VZ95 297 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 OGTO15294 1046 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 SRP72O76094 671 aaKnown RBP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 KDSRQ06136 332 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 EFCAB12Q6NXP0 572 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 WARS2Q9UGM6 360 aaKnown RBP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 ESRRBO95718 433 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 CAP2P40123 477 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 GRAMD4Q6IC98 578 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 CAPN6Q9Y6Q1 641 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 CYP11B1P15538 503 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 KCNA2P16389 499 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 RPS6P62753 249 aaKnown RBP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 PTK6Q13882 451 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 RABGAP1LQ5R372 815 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 OR9Q1Q8NGQ5 310 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 ELMO2Q96JJ3 720 aa13.08□□□□□ -0.32
COL4A6-209ENST00000545689 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
COL4A6-209ENST00000545689 ZNF197O14709 1029 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms