RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 CUEDC2Q9H467 287 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 HEBP1Q9NRV9 189 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 ZMYM5Q9UJ78 669 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 MTMR6Q9Y217 621 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 R4GN57 208 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 ZNF292O60281 2723 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 TSC2P49815 1807 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 A0A1W2PRU2 124 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 FRMD3A2A2Y4 597 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 KPNA7A9QM74 516 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 KIAA0391O15091 583 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 MOSPD3O75425 235 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 VNN2O95498 520 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 CD72P21854 359 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 ADSSP30520 456 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 TFAMQ00059 246 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 TSPY1Q01534 308 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 TAF12Q16514 161 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 TMC8Q8IU68 726 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 BRSK2Q8IWQ3 736 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 DCP1BQ8IZD4 617 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 TMEM130Q8N3G9 435 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 CSGALNACT1Q8TDX6 532 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ZSWIM3Q96MP5 696 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ZNF396Q96N95 335 aaPredicted RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ZCWPW1Q9H0M4 648 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 TNMDQ9H2S6 317 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 PANK4Q9NVE7 773 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 RBAKQ9NYW8 714 aaPredicted RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 TBC1D7Q9P0N9 293 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 SLC27A5Q9Y2P5 690 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
RTN3-213ENST00000543552 PCDHGA2Q9Y5H1 932 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 ANK1P16157 1881 aa14.16□□□□□ -0.14
RTN3-213ENST00000543552 SPTBN4Q9H254 2564 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 HEPACAM2A8MVW5 462 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
RTN3-213ENST00000543552 DPYSL4O14531 572 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 LRRN2O75325 713 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 GJA1P17302 382 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 CDC25CP30307 473 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 VIPR2P41587 438 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
RTN3-213ENST00000543552 AMPD3Q01432 767 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 MGAT5BQ3V5L5 792 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 CRELD2Q6UXH1 353 aaPredicted RBP14.15□□□□□ -0.14
RTN3-213ENST00000543552 DNAJB7Q7Z6W7 309 aaPredicted RBP14.15□□□□□ -0.14
RTN3-213ENST00000543552 EFCAB13Q8IY85 973 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 LRRC52Q8N7C0 313 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 LRRC3Q9BY71 257 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 DNAJC25Q9H1X3 360 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 CRISPLD1Q9H336 500 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 ATXN3LQ9H3M9 355 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 ITGA11Q9UKX5 1188 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
RTN3-213ENST00000543552 PIAS3Q9Y6X2 628 aa14.15□□□□□ -0.14
RTN3-213ENST00000543552 PATJQ8NI35 1801 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 SPTLC2O15270 562 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 CHADO15335 359 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 EXTL3O43909 919 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 HUS1O60921 280 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 PPP6R2O75170 966 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 GABRR2P28476 465 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 NFE2Q16621 373 aaPredicted RBP14.14□□□□□ -0.15
RTN3-213ENST00000543552 WSCD1Q658N2 575 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 POTEHQ6S545 545 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 TMEM86AQ8N2M4 240 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 PDILTQ8N807 584 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 FAM3CQ92520 227 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 HINFPQ9BQA5 517 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 FAM126AQ9BYI3 521 aaPredicted RBP14.14□□□□□ -0.15
RTN3-213ENST00000543552 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 C8orf33Q9H7E9 229 aaPredicted RBP14.14□□□□□ -0.15
RTN3-213ENST00000543552 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 OBP2AQ9NY56 170 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
RTN3-213ENST00000543552 PCDHB5Q9Y5E4 795 aa14.14□□□□□ -0.15
RTN3-213ENST00000543552 TCHHQ07283 1943 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 YEATS4O95619 227 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 ITGB3P05106 788 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
RTN3-213ENST00000543552 TMEM191BP0C7N4 346 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 WEE1P30291 646 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 POLR2BP30876 1174 aaKnown RBP14.13□□□□□ -0.15
RTN3-213ENST00000543552 CASP5P51878 434 aa14.13□□□□□ -0.15
RTN3-213ENST00000543552 KPNA1P52294 538 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms