RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SWI5Q1ZZU3 235 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC38Q502W7 563 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ARHGEF16Q5VV41 709 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 TDRD10Q5VZ19 366 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 HIBCHQ6NVY1 386 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 PPP1R2P3Q6NXS1 205 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 DRICH1Q6PGQ1 229 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 TRAF7Q6Q0C0 670 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ABHD15Q6UXT9 468 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKS1BQ7Z6G8 1248 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 NLRX1Q86UT6 975 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC25Q86WR0 208 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 RHOT1Q8IXI2 618 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ABRAQ8N0Z2 381 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 UBR7Q8N806 425 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC89Q8N998 374 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CPA5Q8WXQ8 436 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ELMO3Q96BJ8 720 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 THAP11Q96EK4 314 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CEP170P1Q96L14 293 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 NCAPGQ9BPX3 1015 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM213AQ9BRX8 229 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 CYP26B1Q9NR63 512 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 HOMER2Q9NSB8 354 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 PIM2Q9P1W9 311 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ANAPC5Q9UJX4 755 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNRF3Q9ULT6 936 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 ADAMTS5Q9UNA0 930 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 USP15Q9Y4E8 981 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 GPSM3Q9Y4H4 160 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 PTPRJQ12913 1337 aa5.51□□□□□ -1.53
ATPAF1-212ENST00000542495 BRCA1P38398 1863 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TCRBV5S1A1TA0A578 114 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SPATA31C2B4DYI2 1134 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TCP11X1B4DZS4 312 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 O00370 1275 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CDH16O75309 829 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 STAM2O75886 525 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PSAPP07602 524 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RALAP11233 206 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CETPP11597 493 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ALADP13716 330 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 JUNDP17535 347 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PTPN7P35236 360 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ADCY8P40145 1251 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 IFNAR2P48551 515 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF132P52740 706 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SLC18A1P54219 525 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 OAZ1P54368 228 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 NCALDP61601 193 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CUL2Q13617 745 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 BAATQ14032 418 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF268Q14587 947 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 STAT4Q14765 748 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 WDR44Q5JSH3 913 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM63BQ5T3F8 832 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LIN9Q5TKA1 542 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LRRC38Q5VT99 294 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SWSAP1Q6NVH7 229 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LLGL2Q6P1M3 1020 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CEP128Q6ZU80 1094 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TDRPQ86YL5 185 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 NPAS4Q8IUM7 802 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC60Q8IWA6 550 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CYP4X1Q8N118 509 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RIBC1Q8N443 379 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZCCHC9Q8N567 271 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TTLL6Q8N841 843 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 C1orf216Q8TAB5 229 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 FEZF2Q8TBJ5 459 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MAML1Q92585 1016 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM84AQ96KN4 292 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 IFT74Q96LB3 600 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MAGEB18Q96M61 343 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SCLT1Q96NL6 688 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 PLCD4Q9BRC7 762 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 OSBPL8Q9BZF1 889 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 HAPLN2Q9GZV7 340 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 POLR3FQ9H1D9 316 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RPAP3Q9H6T3 665 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ATP6V0A4Q9HBG4 840 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 APOBEC3GQ9HC16 384 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MRPL47Q9HD33 250 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF277Q9NRM2 450 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RNF146Q9NTX7 359 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ABCF3Q9NUQ8 709 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 GEMIN8Q9NWZ8 242 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 CTNNAL1Q9UBT7 734 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TCEAL9Q9UHQ7 104 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 MCM8Q9UJA3 840 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 AGAP1Q9UPQ3 857 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 NAALADL1Q9UQQ1 740 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 TELO2Q9Y4R8 837 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 RIPK3Q9Y572 518 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 SCINQ9Y6U3 715 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ADGRA2Q96PE1 1338 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF541Q9H0D2 1346 aa5.5□□□□□ -1.53
ATPAF1-212ENST00000542495 LOC285556D6RIA3 1793 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms