RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FMR1NBQ8N0W7 255 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 SVOPQ8N4V2 548 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 LZTR1Q8N653 840 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ATP6V0D2Q8N8Y2 350 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 USP38Q8NB14 1042 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 APPL2Q8NEU8 664 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 GAB3Q8WWW8 586 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 RPGRQ92834 1020 aaKnown RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ABTB1Q969K4 478 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM63Q969Q1 353 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 FAM149B1Q96BN6 582 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 GRAMD1AQ96CP6 724 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 KLHL29Q96CT2 875 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 PGBD4Q96DM1 585 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 PLPPR2Q96GM1 343 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF496Q96IT1 587 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 PAWRQ96IZ0 340 aaKnown RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF333Q96JL9 665 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 C1orf74Q96LT6 269 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 RPRD1AQ96P16 312 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 MOGAT1Q96PD6 335 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 PASKQ96RG2 1323 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 TSG101Q99816 390 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 TUBB6Q9BUF5 446 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 WDR18Q9BV38 432 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 CDH19Q9H159 772 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 HAUS4Q9H6D7 363 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 PSTPIP2Q9H939 334 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 SUGCTQ9HAC7 445 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 CD209Q9NNX6 404 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 CASS4Q9NQ75 786 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC177Q9NQR7 707 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 AASDHPPTQ9NRN7 309 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 RAD18Q9NS91 495 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ADAM22Q9P0K1 906 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 IFNKQ9P0W0 207 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF212Q9UDV6 495 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 KLHL3Q9UH77 587 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 SLC12A6Q9UHW9 1150 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 KIAA1257Q9ULG3 409 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 VANGL2Q9ULK5 521 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 TMA7Q9Y2S6 64 aaKnown RBP4.59□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 SAR1BQ9Y6B6 198 aa4.59□□□□□ -1.67
SNHG1-219ENST00000542112 ALKQ9UM73 1620 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CDK12Q9NYV4 1490 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MAP3K15Q6ZN16 1313 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 hCG_2014768A0A024R1R8 64 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GOLGA8QA0A0J9YX86 632 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 WDR91A4D1P6 747 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 ANKRD34BA5PLL1 514 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MEGF11A6BM72 1044 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GOLGA8OA6NCC3 632 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 TRIM64A6NGJ6 449 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 TRIM64BA6NI03 449 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MEIS3P2A8K0S8 358 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MIF4GDA9UHW6 222 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GOLGA8NF8WBI6 632 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 IGF2BP3O00425 579 aaKnown RBP eCLIP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GNB5O14775 395 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MCF2LO15068 1137 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 SMAD7O15105 426 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 DDX3YO15523 660 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 EXTL3O43909 919 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GRIN3BO60391 1043 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 AOC2O75106 756 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 TSC22D2O75157 780 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GMNNO75496 209 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 DGKIO75912 1065 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 UFL1O94874 794 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 KLHL2O95198 593 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CRYZL1O95825 349 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GNAI2P04899 355 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 RPS17P08708 135 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 TPBGLP0DKB5 382 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 RBP3P10745 1247 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 IDEP14735 1019 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 RPS2P15880 293 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 SELPP16109 830 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 DRD4P21917 467 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CFL1P23528 166 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 TXKP42681 527 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 GSSP48637 474 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 RGS7P49802 495 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 ALDH5A1P51649 535 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 HSD17B4P51659 736 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 STAT2P52630 851 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 AP3M2P53677 418 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 RAD23BP54727 409 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CASP7P55210 303 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 NUP107P57740 925 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 SRP54P61011 504 aaKnown RBP4.58□□□□□ -1.68
SNHG1-219ENST00000542112 SSTP61278 116 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 ERVK-24P63145 666 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 PPP2R2AP63151 447 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CYP4F2P78329 520 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 MYL5Q02045 173 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 ID3Q02535 119 aa4.58□□□□□ -1.68
SNHG1-219ENST00000542112 CYP4F3Q08477 520 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms