RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 FIGNQ5HY92 759 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
RTL9-203ENST00000540313 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
RTL9-203ENST00000540313 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 C16orf89Q6UX73 402 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 AGR3Q8TD06 166 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
RTL9-203ENST00000540313 TEKT4Q8WW24 435 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 THAP11Q96EK4 314 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 FSD1LQ9BXM9 530 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 KCND1Q9NSA2 647 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 RGL1Q9NZL6 768 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 STAP1Q9ULZ2 295 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 ATP11BQ9Y2G3 1177 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 SPDYE2BA6NHP3 402 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 O00370 1275 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 KDM1AO60341 852 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 CSPG5O95196 566 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 ATP6V1G2O95670 118 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 SPDYE6P0CI01 402 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 AKR1B1P15121 316 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 RAG1P15918 1043 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 FNTAP49354 379 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 ALDH7A1P49419 539 aaKnown RBP6.87□□□□□ -1.31
RTL9-203ENST00000540313 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 OLFML2BQ68BL8 750 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 C16orf86Q6ZW13 317 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 PACS2Q86VP3 889 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 SCN4BQ8IWT1 228 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 MAGEB18Q96M61 343 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 KCND2Q9NZV8 630 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 MARCOQ9UEW3 520 aaPredicted RBP6.87□□□□□ -1.31
RTL9-203ENST00000540313 SALL3Q9BXA9 1300 aa6.87□□□□□ -1.31
RTL9-203ENST00000540313 TBX3O15119 743 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 GHRP10912 638 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 PDHBP11177 359 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 KCNJ1P48048 391 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 SERPINB9P50453 376 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ELAVL2Q12926 359 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 CYLC2Q14093 348 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 ITPRIPL1Q6GPH6 555 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ACTRT1Q8TDG2 376 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 MTG1Q9BT17 334 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 OSBPL8Q9BZF1 889 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 EHD4Q9H223 541 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 CCDC134Q9H6E4 229 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 PIN4Q9Y237 131 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 FNDC3AQ9Y2H6 1198 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 GPR75-ASB3A0A0A6YYF3 556 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 EIF3DO15371 548 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTL9-203ENST00000540313 KCNN4O15554 427 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 SNX2O60749 519 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 EFCAB14O75071 495 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 CAP2P40123 477 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 RAB27AP51159 221 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 NSUN2Q08J23 767 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTL9-203ENST00000540313 DNAJC3Q13217 504 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 PRPF39Q86UA1 669 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 UCMAQ8WVF2 138 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ARHGEF26Q96DR7 871 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 EML4Q9HC35 981 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ZFATQ9P243 1243 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ZC3H7BQ9UGR2 993 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 DMGDHQ9UI17 866 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 AGO2Q9UKV8 859 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 PHTF1Q9UMS5 762 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ARHGAP26Q9UNA1 814 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 MYPNQ86TC9 1320 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 COL5A2P05997 1499 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 NEMP1O14524 444 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ATMINO43313 823 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 SPAG6O75602 509 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 SEC24DO94855 1032 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 IL18RAPO95256 599 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 AKR1A1P14550 325 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 KCNA4P22459 653 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 OAZ1P54368 228 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 BACE1P56817 501 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 DSG1Q02413 1049 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 EIF2B5Q13144 721 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 MKRN4PQ13434 485 aaPredicted RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 INPP5AQ14642 412 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 SMAD1Q15797 465 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 TBCCQ15814 346 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ANKRD23Q86SG2 305 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 SHCBP1Q8NEM2 672 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 CMTM5Q96DZ9 223 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 TMEM169Q96HH4 297 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 ZSWIM1Q9BR11 485 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 DHX35Q9H5Z1 703 aaKnown RBP6.86□□□□□ -1.31
RTL9-203ENST00000540313 ENTPD7Q9NQZ7 604 aa6.86□□□□□ -1.31
RTL9-203ENST00000540313 TBC1D23Q9NUY8 699 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms